Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01312 ATGGAATTCCAAAGTAGAGAGCAGGCTGATAATGCCAAACTTGTTAAAGCTCAAAGTCACATATGGAATCATATTTTTAATTTTATAAATTCTATGTCTCTTAAATGTGCTGTTGAGTTAGGCATACCTGATGTCATTCACAACTATGGCAAACCTATGCCACTTTCACAACTCGTTGCTTCATTGCAAATCCATCCATCAAAAACCTCCTTCGTCCATCGATTGATGAGAATCTTGGTCCATTCCAACTTCTTCACTACCAAGGATGTCGCCAGCAACGACCTCGAAGTTGAAATTGGGTATGTTCTAACCGATTCGTCTATGTTGTTGCTTAAGGACAACCCTTTAAGTCTGTCGCCTCTTGTGGCTGCCATGCTTGATCCCATTACGATGAAACCATGGAACCAGATGTCCACATGGTTTAAAAATGATGATCCTACACCATTTGTAACGGAATATGGGACGGAATTTTTTGATTATGCAAGCCATGTGCCTAAACTCAATAAAATTTTCAACGATGCCATGGCAAGTGATGCTCGATTGGTTAGTAAGTTGTTAGTTGATGAGAAGTGCAAGGGAGTGTTTGAGGGTTTGGAATCATTGGTTGATGTTGGTGGAGGCACCGGAACTGTTGCAAAGGCCATTGCCAAAGCATTCCCACAGTTAGAGTGCACTGTTCTTGACCTTCCACATGTTGTTGCCGATTTGGAAAGAACTGGTAACCTCAAATATGTTGGAGGAGACATGTTTGAGGCTATTCCTCCTTCTAATGCCATCTTGTTGAAGTGGATTTTGCATGACTGGAGTGACGAAGAATGTTTGAAAATATTAAGGAACTGCAAAGAGGCACTACGCATGAGCAAAGGCGAAGGAAGGAAGGTTATTGTTATAGACATGGTGGTGGAGGATGAGAAGAGTGATCATGAGTCACTTGAAACACAACTCTTCTTTGACATCATGATGATG 966 0.4141 MEFQSREQADNAKLVKAQSHIWNHIFNFINSMSLKCAVELGIPDVIHNYGKPMPLSQLVASLQIHPSKTSFVHRLMRILVHSNFFTTKDVASNDLEVEIGYVLTDSSMLLLKDNPLSLSPLVAAMLDPITMKPWNQMSTWFKNDDPTPFVTEYGTEFFDYASHVPKLNKIFNDAMASDARLVSKLLVDEKCKGVFEGLESLVDVGGGTGTVAKAIAKAFPQLECTVLDLPHVVADLERTGNLKYVGGDMFEAIPPSNAILLKWILHDWSDEECLKILRNCKEALRMSKGEGRKVIVIDMVVEDEKSDHESLETQLFFDIMMM 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01312 322 Gene3D - 3 110 IPR036388 -
Aip07g01312 322 Gene3D Vaccinia Virus protein VP39 111 322 IPR029063 -
Aip07g01312 322 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 322 IPR029063 -
Aip07g01312 322 Pfam Dimerisation domain 32 80 IPR012967 GO:0046983
Aip07g01312 322 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 322 IPR016461 GO:0008168
Aip07g01312 322 Pfam O-methyltransferase domain 134 322 IPR001077 GO:0008171
Aip07g01312 322 PANTHER O-METHYLTRANSFERASE 12 322 IPR016461 GO:0008168
Aip07g01312 322 SUPERFAMILY "Winged helix" DNA-binding domain 13 115 IPR036390 -
Aip07g01312 322 CDD AdoMet_MTases 201 301 - -
Aip07g01312 322 PIRSF O-mtase 1 322 IPR016461 GO:0008168
Aip07g01312 322 PANTHER O-METHYLTRANSFERASE 12 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01312 Aip-Chr7 21213028 21215991 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01312 32 322 Monolignol Biosynthesis Gene Families AT5G54160 33.447 1.45e-47 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01312 - K16040 aip:107609507 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01312 07 21213028 21215991 Aip07g01312 07 21213028 21215991 ECH