Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01310 ATGGATGAATTTAGCAGTGGTGATCAAGCTCCTGAGTGGACCAGTAGCAGCAGTGACGATAGCATTTACTATGAGGATGAAGATTCTCATCAAGGTGTTGAGAACACTGATAATATTGAATCTAGCATAGAGAAAGATGATGACAAGGTTACTACAACTATGCTATGGAGTTCTGAGTTTGACGAGGAGGTTCATGCCTATAAAGCTTATATAAAGTATGCGAGAGATATGGGTTTTGTTGTCCGTAAAAGAGACTTGTCAAGAGATGAGGATGTGAATTTGAATAGAAGATACTATGTTTGCAATTGCCAAGGGACAAGGGATCCAAAACACTATCGTCTAGTTGATAGAAAGAGGAATCATAAGCCAGAGACAAGAATTGGTTGCAAGGCACATTGTTCTGTTTATTTGGATAAGTTGTCCATGAAATGGAGAGTTAAGACACTAGAAGAGGAGCACAACCATCCAATGATCCCAGAACAATTTGTTCATTTAATTTCTAGCTATCGGAAGTTGACTGAGGCTGACAAAGTCCGGATTGTTTGCATGAAGGAACCTGGGTTTCAAACTTCTCAAATTGTTGGGGTTTTGGCGAAGCTTGCTGGTGGCTATGATAACCTTAATTTCATGAAGAAGGATGTTTATAACTTCATTGATCGAGATAGGCGTGCAAAGATAGAGAACGGAGATGCTGCGGCAGCAATAAGTTATCTTCAGGGTAAGGCAGATGTGGACCCAATGTCTGTTACTCGTTATACACTAGTCAACGGTAACAAATTGGGTAATCTTTTCTGGGCTGATGGACTTATGATCAATGACTACTAA 825 0.4 MDEFSSGDQAPEWTSSSSDDSIYYEDEDSHQGVENTDNIESSIEKDDDKVTTTMLWSSEFDEEVHAYKAYIKYARDMGFVVRKRDLSRDEDVNLNRRYYVCNCQGTRDPKHYRLVDRKRNHKPETRIGCKAHCSVYLDKLSMKWRVKTLEEEHNHPMIPEQFVHLISSYRKLTEADKVRIVCMKEPGFQTSQIVGVLAKLAGGYDNLNFMKKDVYNFIDRDRRAKIENGDAAAAISYLQGKADVDPMSVTRYTLVNGNKLGNLFWADGLMINDY 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01310 274 Pfam FAR1 DNA-binding domain 70 158 IPR004330 -
Aip07g01310 274 MobiDBLite consensus disorder prediction 1 20 - -
Aip07g01310 274 PANTHER OS02G0262500 PROTEIN 53 268 - -
Aip07g01310 274 MobiDBLite consensus disorder prediction 23 44 - -
Aip07g01310 274 MobiDBLite consensus disorder prediction 1 44 - -
Aip07g01310 274 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 53 268 IPR031052 GO:0006355
Aip07g01310 274 ProSiteProfiles WRKY domain profile. 84 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01310 Aip-Chr7 21188401 21189225 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip07g01310 FAR1 3.1e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01310 - - aip:107606887 561.992