Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01308 ATGAGCAAGGTTGGCACAAGCTTCGGCATATGTGTAGAAGTAGTATGCAGTGATGCAAGCAAGGGTGAAGTGGTGTCATTACTTGTTGGGAAGGCAATTTGTGATCAGTTCAGATCAGCAAGGGCTCAAGGAACTACAAACGCAAAGTATGTCAGTTGCTCTTCCCTAGTGCAGGATGTAGATGACATGCTTTGGGTAAAAGAAGCTCTGGATCTAGAGCTACACTACCAACTGAAAAGGGCTCAAGAACGTATGAAGAAACGATCTAACCAGCAGAGGCGTGAAAAGACCCTTAATGTAACTAGAGTGTATCCATATTCCATACCACAAGATAACATAGCTGAAAGCCAAAAGAGTTGGGGATTCCAAAGTGGAGAGCAAGCTAACAATATGCTTAAAGCTCAATGCCACATATGGAATCATATGTATAGTTTTGTGAACACTGTTTCCCTTAAATGTGCCGTTGACTTAGACATATTTGAAACCATACACAAACATGGAAAACCCATGTCACTCTCACAACTCATTGCTTCATTGCAAATTCACCCTTCAAAAACCACCTTCATCCATCGCTTGATAAGAATCTTGACACATTCCGACTTCTTCGCAACGACAAATGTGGCCGATAACAATAATGAGATCGAAATTGGGTATGTTCTAACTGATTCGTCTATGTTGTTACTTAAGGAACACCCCTTAAGTATAAGGACTTTCTTTGTTAACTCGCTTGATCCAATTTTGACAAATCCATGGAACAAGTTGTCAACATGGTACAAAAATGAAGATCCTACGCCGTTTGAAACAGAGCATGGGATAATGGTATGGGAGTATGGTGGCCGTGAACCTAGGCTCAATCATTTGATCAATGATGCCATGGCAAGTGATGCTAGATTCATTAGCGAAATGGTGATTGAGAAGTGCAAAGGTGTGTTTGAGGGATTGGAATCATTGGTTGATGTTGGTGGAGGCAATGGAACTCTTGCAAAGGCCATTGCCAAATCATTCCCACAGTTGGAGTGCACTGTGCTTGATCAGCCACATGTTGTTGCTGACTTGGAAGGAAGTGACAACCTTAAATATGTTGGAGGGAACATGTTTGAGGCCATTCCTCCTGCGGATGCTGTTTTGATGAAGGGGATTTTGCATGACTGGAATGATAAAGAATGCATTAACATATTGAAGAAAAGCAATGAAGCAATTCTGAGCAAAGGCAAAGAAGGGAAATTGATCATTATAGACATGGTAGTTCAGGAAGATGAGAAGGAAGATCCTGAATTAGTGGAAACGCAACTCTTCTTTGACTTGCTCATGTTGGTTATGGCTGCCGGAAAGGAGAGAAGTGAAAAAGAATGGGCCAAGTTGTTCTTCTCTGCCGGATTCAGTGACTATAAGATAATTCCAGTTTTAGGTATGAGGTCTGTTATTGAGGTCTACCCATAA 1440 0.4146 MSKVGTSFGICVEVVCSDASKGEVVSLLVGKAICDQFRSARAQGTTNAKYVSCSSLVQDVDDMLWVKEALDLELHYQLKRAQERMKKRSNQQRREKTLNVTRVYPYSIPQDNIAESQKSWGFQSGEQANNMLKAQCHIWNHMYSFVNTVSLKCAVDLDIFETIHKHGKPMSLSQLIASLQIHPSKTTFIHRLIRILTHSDFFATTNVADNNNEIEIGYVLTDSSMLLLKEHPLSIRTFFVNSLDPILTNPWNKLSTWYKNEDPTPFETEHGIMVWEYGGREPRLNHLINDAMASDARFISEMVIEKCKGVFEGLESLVDVGGGNGTLAKAIAKSFPQLECTVLDQPHVVADLEGSDNLKYVGGNMFEAIPPADAVLMKGILHDWNDKECINILKKSNEAILSKGKEGKLIIIDMVVQEDEKEDPELVETQLFFDLLMLVMAAGKERSEKEWAKLFFSAGFSDYKIIPVLGMRSVIEVYP 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01308 479 Gene3D Vaccinia Virus protein VP39 228 479 IPR029063 -
Aip07g01308 479 PANTHER O-METHYLTRANSFERASE 126 479 - -
Aip07g01308 479 PANTHER O-METHYLTRANSFERASE 126 479 IPR016461 GO:0008168
Aip07g01308 479 SUPERFAMILY "Winged helix" DNA-binding domain 128 232 IPR036390 -
Aip07g01308 479 Pfam O-methyltransferase domain 251 461 IPR001077 GO:0008171
Aip07g01308 479 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 233 478 IPR029063 -
Aip07g01308 479 Gene3D - 122 227 IPR036388 -
Aip07g01308 479 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 139 479 IPR016461 GO:0008168
Aip07g01308 479 Pfam Dimerisation domain 150 197 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01308 Aip-Chr7 21171089 21176351 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01308 149 466 Monolignol Biosynthesis Gene Families AT5G54160 32.722 1.51e-50 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01308 - - aip:107606886 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01308 07 21171089 21176351 Aip07g01308 07 21171089 21176351 ECH