Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01304 ATGGAATTCCAAAGTGGAGAGCAGGTTGATAATGTCAAACTTCTGAAAGCTCAAACCCACATATGGAATCATATTTTCAATTTTATAAACTCCATGTCTCTTAAATGTGCTGTTGAGTTGGGCATACCTGATGCCATTCACAATTATGGCCAGCCTATGCCACACTCAAAGCTCATTGCTTCATTGCAAATTCATCCATCAAAAACCTCCTTCATCATTCGCTTGATGAGAATCTTGATCCATTCCGGCTTCTTCGCTACCAAGAATGGTGCTGACAAAGACCTTGAAGTAAGTTATGTTCTAACTGACTCGTCTGTGTTGCTGCTTAAGGGAAACCCTATAAGCATCAGGCCTTTCTTGCTTGTCACGCTTGATCCAATTTTGACAAATCCATGGCATAAATTGTCCACATGGTTCCAAAGTGATAATCCCACACCATTTGAAACGGAACATGGGATCATGTTTTGGAGATATGCTGATCATGAGCCTAAACTTAATGAACTTTTCAATGATGCCATGGCGAGTGATGCTCGATTGGTTAGCAACTTGTTACTTAATGACAAGTGGAAGGGTGTGTTTGAGGGTTTGGAATCATTGGTTGATGTTGGTGGTGGCACAGGAACCGTTGCAAAGGCTATTGCAAAATCATTTCCTGCGTTAGAGTGCACTGTTCTTGATCTCCCACATGTTATTGCTGGCTTGGAAGGAAGTGAAAACCTTAAATATGTTGGAGGGGATATGTTTGAGGTCATTCCTCCCTCTAATGCCATTTTGTTAAAGTGGATTTTGCATGACTGGGAGGACAAGGAATGTTTGAAGATATTGAGGAAATGCAAGGAGGCAATCATGAATAATGGCAGCAAAGGAGGAAAGATGATGGTGTTACACGCTGGCAAGGAGAAAAATGAAAAAGAATGGGTCAAGCTAATATTTTGTGCTGGTTTTAGTGACTACAAGATAACTCCAATTCTTGGACTCAGGTCTCTCATTGAGATATATCCATAG 1005 0.409 MEFQSGEQVDNVKLLKAQTHIWNHIFNFINSMSLKCAVELGIPDAIHNYGQPMPHSKLIASLQIHPSKTSFIIRLMRILIHSGFFATKNGADKDLEVSYVLTDSSVLLLKGNPISIRPFLLVTLDPILTNPWHKLSTWFQSDNPTPFETEHGIMFWRYADHEPKLNELFNDAMASDARLVSNLLLNDKWKGVFEGLESLVDVGGGTGTVAKAIAKSFPALECTVLDLPHVIAGLEGSENLKYVGGDMFEVIPPSNAILLKWILHDWEDKECLKILRKCKEAIMNNGSKGGKMMVLHAGKEKNEKEWVKLIFCAGFSDYKITPILGLRSLIEIYP 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01304 334 SUPERFAMILY "Winged helix" DNA-binding domain 14 113 IPR036390 -
Aip07g01304 334 PANTHER ORCINOL O-METHYLTRANSFERASE 291 334 - -
Aip07g01304 334 PANTHER ORCINOL O-METHYLTRANSFERASE 9 286 - -
Aip07g01304 334 PIRSF O-mtase 290 334 IPR016461 GO:0008168
Aip07g01304 334 PIRSF O-mtase 1 297 IPR016461 GO:0008168
Aip07g01304 334 CDD AdoMet_MTases 199 294 - -
Aip07g01304 334 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 332 IPR029063 -
Aip07g01304 334 PANTHER O-METHYLTRANSFERASE 291 334 IPR016461 GO:0008168
Aip07g01304 334 PANTHER O-METHYLTRANSFERASE 9 286 IPR016461 GO:0008168
Aip07g01304 334 Pfam O-methyltransferase domain 132 286 IPR001077 GO:0008171
Aip07g01304 334 Gene3D - 4 108 IPR036388 -
Aip07g01304 334 Gene3D Vaccinia Virus protein VP39 110 334 IPR029063 -
Aip07g01304 334 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 334 IPR016461 GO:0008168
Aip07g01304 334 Pfam Dimerisation domain 32 79 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01304 Aip-Chr7 21032418 21034364 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01304 32 320 Monolignol Biosynthesis Gene Families AT5G54160 30.915 2.00e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01304 - K16040 aip:107609507 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01304 07 21032418 21034364 Aip07g01304 07 21032418 21034364 ECH