Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01301 ATGGTTTCGAGGGTTCACAAGAGAACAGGTTTTCATAGGAACCTTCAACATCTTCGCTCAATCACTAAATCCCATGCGCTATTTAAAACATCAGTGATATTGGATGCATCAGAGTATATACGGAGTCTAAAGAAAAAGCTACAAGAATCGGATGAGCTAGCAGTTTGTTCTTCTTCAGTCCAAAATTTCATTGACCATGGTCCCATGCCTATGCTTAAAGTTGAAGCACAAGAGGATGGGTTCATGATAAGGGTGCTGAGTCAAAGGAATTGCAAAGGGTTGTTGGTTTTCATATTGGAAGCGTTTGAAGAGCTTGGCCTTCAAGTGCTCCAGGCTAGGGAGCACAATGAAGGTGATGATGATGATGGTCATATGGATGCACAAGTAGTAGAACAAGTGATGTCTAAAGCTATCAAAAACTGGAGGGAACTTCCAAAGCAATAA 444 0.4122 MVSRVHKRTGFHRNLQHLRSITKSHALFKTSVILDASEYIRSLKKKLQESDELAVCSSSVQNFIDHGPMPMLKVEAQEDGFMIRVLSQRNCKGLLVFILEAFEELGLQVLQAREHNEGDDDDGHMDAQVVEQVMSKAIKNWRELPKQ 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01301 147 PANTHER TRANSCRIPTION FACTOR BHLH93-LIKE PROTEIN 1 143 - -
Aip07g01301 147 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01301 Aip-Chr7 20930371 20931604 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01301 - - adu:107458139 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01301 07 20930371 20931604 Aip07g01301 07 20930371 20931604 ECH
Aip07g01301 07 20930371 20931604 Aip10g01396 10 23749632 23752410 ECH
Aip04g02390 04 108732574 108740780 Aip07g01301 07 20930371 20931604 ECH
Aip02g02454 02 98198781 98201257 Aip07g01301 07 20930371 20931604 ECH
Aip01g00293 01 3123992 3127293 Aip07g01301 07 20930371 20931604 ECH
Aip07g01301 07 20930371 20931604 Aip01g00293 01 3123992 3127293 ECH
Aip01g00293 01 3123992 3127293 Aip07g01301 07 20930371 20931604 PCT