Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01295 ATGACCGTCGCACCACCCAGCTCGCCTTCATCTAACCCTCACACCCAGCCCTCTCTCTGTCGCACCCTAGTTGTTTCTCAACGGTCTCTCGCACCATCAACGCTGCTCCGTCTACGCACCCAGGAATCGGCGCTGCTCCATCCACGCACCCTCGTCGGATTCGGAACCTCCATCGGCGAGGAGAAGAGGAAGAGGAAAACCTTAGAGGAGAAGCCCTCCGCCGATTCCGCAATCGAAGCTTTGGAGAAGAAGAGGAAGTACCACGAGTCAATTGAAGAGGAGGAACAAGACTCACACCCTCTGTGTGAGTACGAGAAGGTTGAGAAGATTGGGGAAGGAACCTACAGCGTCATTTACAAGGCTCGCGACCACGTTACCAATGAGACCATCGCTCTCAAGAAGATTCACCTTGAGCAGGAGGATGAAGGCGTTCCTAGCACTGCAATTCGCGAGATTTCTCTCCTTAAGGAAATGCAGCATAGGAATATTGTTAGTAATTTGTGTTTATGGTTTCAATTGGTGAAATTCATGTGA 534 0.5112 MTVAPPSSPSSNPHTQPSLCRTLVVSQRSLAPSTLLRLRTQESALLHPRTLVGFGTSIGEEKRKRKTLEEKPSADSAIEALEKKRKYHESIEEEEQDSHPLCEYEKVEKIGEGTYSVIYKARDHVTNETIALKKIHLEQEDEGVPSTAIREISLLKEMQHRNIVSNLCLWFQLVKFM 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01295 177 Coils Coil 77 97 - -
Aip07g01295 177 Gene3D Phosphorylase Kinase; domain 1 84 172 - -
Aip07g01295 177 SUPERFAMILY Protein kinase-like (PK-like) 100 171 IPR011009 -
Aip07g01295 177 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Aip07g01295 177 PANTHER CELL DIVISION PROTEIN KINASE 102 166 - -
Aip07g01295 177 ProSiteProfiles Protein kinase domain profile. 104 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g01295 177 Pfam Protein kinase domain 104 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g01295 177 PANTHER - 102 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01295 Aip-Chr7 20858527 20859357 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01295 103 164 Core Cell Cycle Gene Families AT3G48750 90.323 4.98e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Aip07g01295 Pkinase 1e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01295 K02206 - gmx:100782865 115.546