Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01280 ATGGATAAGTGGCCTTCTTCCAACCTTGGATATTCTGACTTGGATGCTGACCACCTTGTTGATTTCATATGCAGACTACCCCAGATCCCTAGCCTCCATCGGCGCCGTCTCTGTCAAAGCCGCATCTGCCAGTCTCCGCCGTCTCCTCTGTCTCGGATTGATTTTATTTTAGTTATGGCAACTGCAACATACCCGCCGCCCCCACCATATTATAGGCTCTACAAAGATTACTTGGAGGACCCTAAGTCTGCTCCAGAGCCTCCTCCTCCCATAGAAGGGACCTACGTTTGTTTTGGGGGCACCTATACTACTAGTGATGTTTTGCCAAGCTTGGAAGAACAAGGGGTGCGCCAACTCTATCCAAAGGGGGCTAATGTTGATTTCAAGAAGGAGCTGAGATCACTGAATGGAGAATTGCAGCTACACATTTTGGAGCTTGCAGATATTCTTATTGAGAGACCATCACAGTATGCAAGGAGAGTTGAAGAGATTTCGACTGTATTCAAAAACTTACATCACCTTTTAAATTCCTTGCGACCTCATCAGGCAAGAGCAACATTAATTCACATTTTGGAACTTCAGATTGAGCGTCGTAAAGAAGCAGTGGAAGACATAAAGAAGAGAAGAGAAGAGGCACGAAGACTACTTAACGAGTCCCTAGCAACACTTGATGACCAATAG 681 0.4567 MDKWPSSNLGYSDLDADHLVDFICRLPQIPSLHRRRLCQSRICQSPPSPLSRIDFILVMATATYPPPPPYYRLYKDYLEDPKSAPEPPPPIEGTYVCFGGTYTTSDVLPSLEEQGVRQLYPKGANVDFKKELRSLNGELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSLRPHQARATLIHILELQIERRKEAVEDIKKRREEARRLLNESLATLDDQ 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01280 226 Coils Coil 188 222 - -
Aip07g01280 226 Pfam MED7 protein 62 216 IPR009244 GO:0003712|GO:0006357|GO:0016592
Aip07g01280 226 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 60 226 IPR009244 GO:0003712|GO:0006357|GO:0016592
Aip07g01280 226 Gene3D - 120 217 IPR044888 -
Aip07g01280 226 SUPERFAMILY Mediator hinge subcomplex-like 125 217 IPR037212 GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01280 Aip-Chr7 20501173 20507591 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Aip07g01280 Med7 6.9e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01280 K15148 - gmx:100792250 294.278