Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01275 ATGGGGAGGAAGCAAAGCTTAAACACAGTGACACCATGTGCTGCTTGCAAGCTTCTTAGAAGAAGGTGTGCTGAGGAGTGTCCCTTCTCTCCTTATTTCTCACCACATGAGCCTCAAAAGTTTGCTGCTGTTCATAAAGTCTTTGGTGCAAGCAATGTCTCCAAGATGCTCATGGAAGTAGGAGAGGGACAAAGAGCAGATGCAGCAAACAGTTTGGTATATGAAGCAAACTTGAGATTAAGAGATCCAGTTTATGGATGCATGGGTGCAATTTCAGGTTTGCAGCAACAAATTCAAACATTGCAAGCTGAAGTCAATGCTGTTAGGGCTGAGATTCTCAAATACAAATATAGAGAAGCTGCTGCCACTGCCACTGCCACTCTCATTTCCATGAATCATCATCATCATCACCATCTTCCATCTAATAATCAAGCACCAATAATAATCAATAATAATAATAATGATAATAATGCTGCAAACTCTTCATCACAACAACAAGGTATTTCTCAACCTCCTCTTCCTCCACCTTTGCGCCCTGTGCCGCCAAATCCATCTTTACCTTCACCTTCTACTGTTGTGCTTTCGTCGTCTTTGTCTTCGTCTTCGGCTTCTTCTGTTTACAACAACACTCCACCTAAAACCACATTGAGTCATGGATCCATTACTAGTGAAAGTGTTCCTTACTTTGCTTAA 693 0.417 MGRKQSLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVGEGQRADAANSLVYEANLRLRDPVYGCMGAISGLQQQIQTLQAEVNAVRAEILKYKYREAAATATATLISMNHHHHHHLPSNNQAPIIINNNNNDNNAANSSSQQQGISQPPLPPPLRPVPPNPSLPSPSTVVLSSSLSSSSASSVYNNTPPKTTLSHGSITSESVPYFA 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01275 230 MobiDBLite consensus disorder prediction 143 168 - -
Aip07g01275 230 ProSiteProfiles LOB domain profile. 11 112 IPR004883 -
Aip07g01275 230 MobiDBLite consensus disorder prediction 169 188 - -
Aip07g01275 230 PANTHER LOB DOMAIN PROTEIN 5 229 - -
Aip07g01275 230 MobiDBLite consensus disorder prediction 134 230 - -
Aip07g01275 230 Pfam Lateral organ boundaries (LOB) domain 12 108 IPR004883 -
Aip07g01275 230 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 229 - -
Aip07g01275 230 Coils Coil 91 118 - -
Aip07g01275 230 MobiDBLite consensus disorder prediction 189 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01275 Aip-Chr7 20372848 20374109 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01275 6 120 AS2 family AT2G30340 84.348 4.53e-71 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aip07g01275 LOB 1.6e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01275 - - adu:107458169 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01275 07 20372848 20374109 Aip07g01275 07 20372848 20374109 ECH