Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01272 ATGGATAGCACTACAAATACCTTGTTGCAAAGATATGAATTGGGAAGGCTACTAGGCCAAGGAACCTTTGGCAAGGTTTACTATGCAAGGAGCGCGATTACTAACCAGAGTGTGGCCATCAAAGTAATTGACAAAGATAAAGTTGTTAGAACCGGGCAATGCGAGCGGATTAAGAGGGAAGTAACTATTATGAGGTTGGTTCGTCATCCGTATATAATTCAGCTTCTTGAGATCATGGCCACCAAGAGCAAGATTTACTTTGTTATGGAGTATGCGAAAGGTGGCGAGCTTTTTGACCTTGTGGCCAAAGGAAAGCTCAAAGAAGAAGTTGCTTACAAGTATTTTAGGCAGCTAGTGAATGCAGTCGATTTTTGTCACAGTCGAGGTGTATACCATAGAGATATAAAGCCGGAGAATCTTCTGTTGGATGAGAATGAGAATCTTAAGGTGTCGGATTTTGGGTTGAGTGCGTTGGCCGAATCGAAAAGGAAGGACGGATTGCTGCATACAACTTGTGGAACTCCTTCCTATGTTGCCCCTGAAGTCATTAGAAGGAAAGGTTATGATGGTATAAAAGCTGATATTTGGTCTTGTGGAGTAGTTCTCTTTGTCCTGTTGGCAGGGTATCTCCCTTTTCATGATTCAAATTTGATCGAGATGTACAGAAAGATAAGCAAAGGCGAATTCATTTGTCCGAGTTGGTTCCCGAACAATGTCCGGCGGCTATTGTGCAAGATGTTGGATCCAGATCCAGAAAATAGGGCTACCATAGCTAAGATCAGGGAGTCATCTTGGTTTAGGAAAGGGCCAAATGCTAGACAGAAAAAGCTTGAAGTCGAAAACAAGTCCATCACAAATTGTGCTGATCAAAACAATGAAGGTGATAATGCAGTGGCTGAATCAAATCAAGAGCCGGCTGCTACAAGTATAAACGCCTTTGATATCATAAGCCTGTCCTCTGGCTTCAACCTTAATGGATTCTTTGAAGACAGTTTCCAGAAAAGGGAAGCAAGGTTTACTTCCAGACAGCCGGCACCCGTCATCATATCGAGGTTGGAAGAAATTGCGAAGCGGCTAAAGATGAAGATAAAGAAGAAGGCTGCTGGTTTGTTGAAATTAGAAGGACTCAAAGAAGGTAGGAAGGGGAATCTATCACTGGATGCGGAGATCTTTGAGGTTACTCCATATTTCCATTTGGTGGAAGTGAAAAAATCCAATGGGGACACAATGGAATATCAAGAAATTATGGATAAGGATATAAGGCCTGCCCTTAAGGACATTGTTTGGGTTTGGCAAGGTGAAAATCAACAAGAGCAATCACAACAGTCGGCACAACTGAAACATGAGAACGAAGAGCAGTAA 1362 0.4244 MDSTTNTLLQRYELGRLLGQGTFGKVYYARSAITNQSVAIKVIDKDKVVRTGQCERIKREVTIMRLVRHPYIIQLLEIMATKSKIYFVMEYAKGGELFDLVAKGKLKEEVAYKYFRQLVNAVDFCHSRGVYHRDIKPENLLLDENENLKVSDFGLSALAESKRKDGLLHTTCGTPSYVAPEVIRRKGYDGIKADIWSCGVVLFVLLAGYLPFHDSNLIEMYRKISKGEFICPSWFPNNVRRLLCKMLDPDPENRATIAKIRESSWFRKGPNARQKKLEVENKSITNCADQNNEGDNAVAESNQEPAATSINAFDIISLSSGFNLNGFFEDSFQKREARFTSRQPAPVIISRLEEIAKRLKMKIKKKAAGLLKLEGLKEGRKGNLSLDAEIFEVTPYFHLVEVKKSNGDTMEYQEIMDKDIRPALKDIVWVWQGENQQEQSQQSAQLKHENEEQ 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01272 453 Gene3D Transferase(Phosphotransferase) domain 1 99 309 - -
Aip07g01272 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Aip07g01272 453 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 445 - -
Aip07g01272 453 Gene3D Phosphorylase Kinase; domain 1 5 98 - -
Aip07g01272 453 Pfam NAF domain 308 365 IPR004041 GO:0007165
Aip07g01272 453 CDD CIPK_C 311 425 - -
Aip07g01272 453 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g01272 453 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Aip07g01272 453 Gene3D Kinase associated domain 1, KA1 310 430 - -
Aip07g01272 453 SUPERFAMILY Protein kinase-like (PK-like) 9 281 IPR011009 -
Aip07g01272 453 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g01272 453 PANTHER - 2 445 - -
Aip07g01272 453 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g01272 453 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01272 Aip-Chr7 20310105 20312676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01272 1 440 CBL-interacting serine-threonine protein kinases AT5G58380 66.812 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aip07g01272 Pkinase 2.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01272 - K07198 gmx:100779316 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01272 07 20310105 20312676 Aip07g01272 07 20310105 20312676 ECH
Aip07g01272 07 20310105 20312676 Aip10g01385 10 23450092 23451423 ECH
Aip04g02406 04 109250925 109252516 Aip07g01272 07 20310105 20312676 ECH
Aip01g00280 01 2987464 2988849 Aip07g01272 07 20310105 20312676 ECH
Aip07g01272 07 20310105 20312676 Aip01g00280 01 2987464 2988849 ECH
Aip01g00280 01 2987464 2988849 Aip07g01272 07 20310105 20312676 PCT