Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01247 ATGCAAGATCCACCACCAACACCACCACCTCCAAACTCCGCTTCCCACTTACCTCCACCGGCCCCCTCCACCGCCGCAACTTCCTCAGCCTCCTCACTCTTCGTTCGCTCCGCCGCCAATGGCCACCGCCGAGCTCACTCTGAGGTCAGTTTCCGCTTACCTGACGACATGATGGACCTCTCGCCGTCGGATCCGTTCACCGGCGGCTCCTCCACGGCCAGCCTCGACGAGATCGGATCGGAGGATGACCTGTTCACGACGTACATTGACGTGGACAAGCTCGGGAATGGCTCGGGCGGATCGGGAAACGGATCGGATCCGATTGGTAACGGTACAGAATCGGAGAAGGCGGTTCCGAGGCCGAGGCATAGGCACAGTAACTCTGTGGATGGTTCTACGACGTCGTTTGGGGAGATCATGGACGCTAAGAAAGCTATGCCTCCTGATAAGCTCGCTGAGCTTTGGACCATTGATCCCAAGCGTGCTAAGAGGATACTTGCAAATAGGCAATCTGCTGCTCGATCAAAAGAGAGAAAGGCTCGCTACATTCAAGAACTTGAGCGCAAAGTTCAGACTCTTCAAACTGAAGCCACAACCCTTTCTGCCCAGCTGACACTATACCAGAGGGACACAAATGGTCTGAGTACTGAAAACACAGAGCTTAAGCTCCGCCTGCAAGCCATGGAGCAACAAGCACAACTTCGTGATGCTCTTAATGAGGCACTGAAGAAAGAAGTCGAGAGGCTTAAGGTTGCCACTGGCGAAATGATGAGCCCCACTGAGTCTTTTAACCTTGGAATGCACCAGATGCCATTCACAGGAGCAAATTTCTTTCCGATCCAACCCCAATCAGGTCCTTCTGATCACCAGAACATGCAGTTGCCACCATTTGCTCATGCCCCATCTGGCATGCCAACGCATCAACTACAACAATCGAGTTCTCATCCACTCTCGGAAATAATGCAAAATCATATGCAGGGACTCGACATCAACAGCAAAGGACCAACTACGGTGAAGTCCGAAGGCCCATCAATTTCTGCAAGTGAGAGTAGCACTACATTCTGA 1065 0.5258 MQDPPPTPPPPNSASHLPPPAPSTAATSSASSLFVRSAANGHRRAHSEVSFRLPDDMMDLSPSDPFTGGSSTASLDEIGSEDDLFTTYIDVDKLGNGSGGSGNGSDPIGNGTESEKAVPRPRHRHSNSVDGSTTSFGEIMDAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTNGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKVATGEMMSPTESFNLGMHQMPFTGANFFPIQPQSGPSDHQNMQLPPFAHAPSGMPTHQLQQSSSHPLSEIMQNHMQGLDINSKGPTTVKSEGPSISASESSTTF 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01247 354 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 15 351 - -
Aip07g01247 354 Gene3D - 159 212 - -
Aip07g01247 354 CDD bZIP_plant_RF2 161 210 IPR044759 GO:0003700|GO:0006355
Aip07g01247 354 MobiDBLite consensus disorder prediction 329 354 - -
Aip07g01247 354 MobiDBLite consensus disorder prediction 1 18 - -
Aip07g01247 354 PANTHER ATBZIP TRANSCRIPTION FACTOR 15 351 - -
Aip07g01247 354 SMART brlzneu 156 220 IPR004827 GO:0003700|GO:0006355
Aip07g01247 354 Coils Coil 211 255 - -
Aip07g01247 354 MobiDBLite consensus disorder prediction 1 78 - -
Aip07g01247 354 MobiDBLite consensus disorder prediction 95 136 - -
Aip07g01247 354 SUPERFAMILY Leucine zipper domain 160 211 IPR046347 GO:0003700|GO:0006355
Aip07g01247 354 Pfam bZIP transcription factor 160 217 IPR004827 GO:0003700|GO:0006355
Aip07g01247 354 Coils Coil 176 203 - -
Aip07g01247 354 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 158 221 IPR004827 GO:0003700|GO:0006355
Aip07g01247 354 MobiDBLite consensus disorder prediction 19 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01247 Aip-Chr7 19577122 19580355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01247 1 354 bZIP Transcription Factor Family AT2G40620 51.870 7.81e-100 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip07g01247 bZIP_1 6.2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01247 - - gmx:778172 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01247 07 19577122 19580355 Aip07g01247 07 19577122 19580355 ECH
Aip01g00260 01 2782486 2785656 Aip07g01247 07 19577122 19580355 PCT