LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip07g01245	ATGGATCTCCTCCTCCTGGAGAAGACTCTGGTCGGCCTATTCGTCGCTACAATTCTTGCCGTCGTTATCTCCACCCTCCGCGGCCGCAAATTCAAGCTTCCGCCGGGACCCTTTCCTGTTCCCATCTTCGGTAACTGGCTCCAGGTCGGCGATGACCTCAACCACCGCAACCTCACCGATCTCGCCAAGAAATTCGGCGACATCTTCCTCCTCCGCATGGGGCAGCGCAACCTTGTCGTTGTTTCTTCCCCTCACCTCGCCAAGGAGGTTCTCCACACTCAGGGCGTCGAATTCGGTTCCCGCACCCGTAACGTCGTCTTCGACATCTTCACTGGAAAGGGCCAGGATATGGTGTTCACCGTTTACGGTGAGCATTGGAGGAAGATGAGGAGGATCATGACGGTGCCGTTCTTCACGAACAAGGTGGTACAGCAGTACCGTCCCGGTTGGGAAGCGGAGGCGGCCAGCGTGGTGGAGGATGTTAAGAAGAATCCAGAAGCCGCGACGTCCGGGATAGTGCTGAGGAGGAGGCTGCAGCTGATGATGTACAACAACATGTACAGGATAATGTTTGACAGGAGGTTTGAGAATGAAGAGGATCCATTGTTTCAGAAGCTTAAGGCACTTAATGGTGAGAGGAGTAGGCTTGCTCAGAGCTTTGAGTATAACTATGGTGATTTCATTCCTATCTTGAGGCCTTTCTTGAGAGGTTACTTGAAGATCTGCAAGGAGGTTAAGGAAACCAGGTTGAAGCTCTTCAAAGACTTTTTTGTTGATGAGAGGAAGAAGCTTGGAAGCACAAGGAGTTCAGATAACGGGGAACTGAAATGCGCCATCGATCACATTTTGGATGCCCAGAAAAAGGGCGAAATCAACGAAGACAACGTCCTTTACATTGTCGAGAACATTAACGTTGCTGCAATTGAGACAACTTTATGGTCGATTGAATGGGGAATTGCTGAGCTAGTGAACCACCCAGAGATTCAGAAGAATGTTAGGGATGAAATTGACACAGTCCTTGGACCAGGCCACCAAGTAACAGAGCCAGATTTGCAAAAACTCCCTTACCTCCAAGCAGTGATCAAGGAAACCCTTCGTCTCCGCATGGCGATCCCACTCCTCGTCCCACACATGAACCTCCACGACGCCAAGCTCGGTGGCTATGACATCCCGGCAGAGAGCAAGATCTTGGTCAACGCATGGTGGCTCGCAAATAACCCCGCCAACTGGAAGAACCCAGAGGAGTTTAGGCCCGAGAGGTTCCTTCAGGAGGAGAAGCATGTTGAGGCCAACGGCAATGACTTCAGGTATCTTCCCTTTGGTGTTGGAAGAAGGAGCTGCCCTGGAATCATCCTTGCATTGCCAATTCTCGGAATCACTTTGGGGCGTTTGGTCCAAAACTTCGAGCTCTTGCCGCCGCCGGGGCAGACCAAGTTGGACACTACTGAGAAAGGAGGACAGTTTAGTTTGCACATACTCAAGCATTCCACCATTGTGGCAAAGCCAAGATCATTCTAA	1518	0.5112	MDLLLLEKTLVGLFVATILAVVISTLRGRKFKLPPGPFPVPIFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPHLAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRPGWEAEAASVVEDVKKNPEAATSGIVLRRRLQLMMYNNMYRIMFDRRFENEEDPLFQKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKETRLKLFKDFFVDERKKLGSTRSSDNGELKCAIDHILDAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKNVRDEIDTVLGPGHQVTEPDLQKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPANWKNPEEFRPERFLQEEKHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQTKLDTTEKGGQFSLHILKHSTIVAKPRSF	505

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Aip07g01245	505	PRINTS	E-class P450 group I signature	62	81	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Aip07g01245	505	PRINTS	E-class P450 group I signature	86	107	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Aip07g01245	505	PRINTS	E-class P450 group I signature	181	199	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Aip07g01245	505	PRINTS	E-class P450 group I signature	295	312	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Aip07g01245	505	PRINTS	E-class P450 group I signature	315	341	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Aip07g01245	505	PRINTS	E-class P450 group I signature	358	376	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Aip07g01245	505	PRINTS	E-class P450 group I signature	399	423	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Aip07g01245	505	PRINTS	E-class P450 group I signature	437	447	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Aip07g01245	505	PRINTS	E-class P450 group I signature	447	470	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Aip07g01245	505	PANTHER	TRANS-CINNAMATE 4-MONOOXYGENASE	1	505	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip07g01245	Aip-Chr7	19427192	19432049	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip07g01245	1	504	Monolignol Biosynthesis Gene Families	AT2G30490	84.921	0.0	880

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip07g01245	K00487		-	gmx:100818985	937.176

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aip07g01245	07	19427192	19432049	Aip07g01245	07	19427192	19432049	ECH
	Aip01g00239	01	2468429	2476183	Aip07g01245	07	19427192	19432049	PCT

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