Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01245 ATGGATCTCCTCCTCCTGGAGAAGACTCTGGTCGGCCTATTCGTCGCTACAATTCTTGCCGTCGTTATCTCCACCCTCCGCGGCCGCAAATTCAAGCTTCCGCCGGGACCCTTTCCTGTTCCCATCTTCGGTAACTGGCTCCAGGTCGGCGATGACCTCAACCACCGCAACCTCACCGATCTCGCCAAGAAATTCGGCGACATCTTCCTCCTCCGCATGGGGCAGCGCAACCTTGTCGTTGTTTCTTCCCCTCACCTCGCCAAGGAGGTTCTCCACACTCAGGGCGTCGAATTCGGTTCCCGCACCCGTAACGTCGTCTTCGACATCTTCACTGGAAAGGGCCAGGATATGGTGTTCACCGTTTACGGTGAGCATTGGAGGAAGATGAGGAGGATCATGACGGTGCCGTTCTTCACGAACAAGGTGGTACAGCAGTACCGTCCCGGTTGGGAAGCGGAGGCGGCCAGCGTGGTGGAGGATGTTAAGAAGAATCCAGAAGCCGCGACGTCCGGGATAGTGCTGAGGAGGAGGCTGCAGCTGATGATGTACAACAACATGTACAGGATAATGTTTGACAGGAGGTTTGAGAATGAAGAGGATCCATTGTTTCAGAAGCTTAAGGCACTTAATGGTGAGAGGAGTAGGCTTGCTCAGAGCTTTGAGTATAACTATGGTGATTTCATTCCTATCTTGAGGCCTTTCTTGAGAGGTTACTTGAAGATCTGCAAGGAGGTTAAGGAAACCAGGTTGAAGCTCTTCAAAGACTTTTTTGTTGATGAGAGGAAGAAGCTTGGAAGCACAAGGAGTTCAGATAACGGGGAACTGAAATGCGCCATCGATCACATTTTGGATGCCCAGAAAAAGGGCGAAATCAACGAAGACAACGTCCTTTACATTGTCGAGAACATTAACGTTGCTGCAATTGAGACAACTTTATGGTCGATTGAATGGGGAATTGCTGAGCTAGTGAACCACCCAGAGATTCAGAAGAATGTTAGGGATGAAATTGACACAGTCCTTGGACCAGGCCACCAAGTAACAGAGCCAGATTTGCAAAAACTCCCTTACCTCCAAGCAGTGATCAAGGAAACCCTTCGTCTCCGCATGGCGATCCCACTCCTCGTCCCACACATGAACCTCCACGACGCCAAGCTCGGTGGCTATGACATCCCGGCAGAGAGCAAGATCTTGGTCAACGCATGGTGGCTCGCAAATAACCCCGCCAACTGGAAGAACCCAGAGGAGTTTAGGCCCGAGAGGTTCCTTCAGGAGGAGAAGCATGTTGAGGCCAACGGCAATGACTTCAGGTATCTTCCCTTTGGTGTTGGAAGAAGGAGCTGCCCTGGAATCATCCTTGCATTGCCAATTCTCGGAATCACTTTGGGGCGTTTGGTCCAAAACTTCGAGCTCTTGCCGCCGCCGGGGCAGACCAAGTTGGACACTACTGAGAAAGGAGGACAGTTTAGTTTGCACATACTCAAGCATTCCACCATTGTGGCAAAGCCAAGATCATTCTAA 1518 0.5112 MDLLLLEKTLVGLFVATILAVVISTLRGRKFKLPPGPFPVPIFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPHLAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRPGWEAEAASVVEDVKKNPEAATSGIVLRRRLQLMMYNNMYRIMFDRRFENEEDPLFQKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKETRLKLFKDFFVDERKKLGSTRSSDNGELKCAIDHILDAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKNVRDEIDTVLGPGHQVTEPDLQKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPANWKNPEEFRPERFLQEEKHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQTKLDTTEKGGQFSLHILKHSTIVAKPRSF 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01245 505 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g01245 505 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g01245 505 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g01245 505 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g01245 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g01245 505 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g01245 505 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g01245 505 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g01245 505 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g01245 505 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 505 - -
Aip07g01245 505 SUPERFAMILY Cytochrome P450 34 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g01245 505 Gene3D Cytochrome P450 22 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g01245 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Aip07g01245 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g01245 505 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g01245 505 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g01245 505 Pfam Cytochrome P450 34 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g01245 505 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01245 Aip-Chr7 19427192 19432049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01245 1 504 Monolignol Biosynthesis Gene Families AT2G30490 84.921 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01245 K00487 - gmx:100818985 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01245 07 19427192 19432049 Aip07g01245 07 19427192 19432049 ECH
Aip01g00239 01 2468429 2476183 Aip07g01245 07 19427192 19432049 PCT