Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01226 ATGGCAAAGGGTTGCACAAACAACGATTATGAGGAGGCTAGGAAACAAAGGCTAGAAGAAAACAAGAAGCGGTTTGAGGATTTGGGAATTTCAACAATTTCAAAGAATTTGTCTGAAATTGCGAGTTCTGTTAAGAAGTCTCCGTATCGTTCTCCTAAACCGAAATCAAAGAGGGATGTTGTAGTGGAACCAAGGCGTTCTTCTCGTGTACGGAACCCAGTTCGTACATACCGTGAAGATGGTGACATAGAACTTCCAACTTTTCGGAAAAGGTCAAGGTCAAGTTCATCATGGGGAAGTTATATTGCAAGGCCACTAGATGAAATCAAGGAAGCTACAGTTGAACAAAGAGCTCGAGCTTTGGAGGCTGCGGAAAAACTCCAAAGCAATTTGCAGTCTGAGAATCCATCATTTATTAAGTCAATGGTCCGGTCTCATGTTTATAGCTGCTTTTGGTTGGGTCTTCCTTTGAGATTTTGTGCAAAACATCTCCCAAAAACTGTATGTAACATGATTTTAGAGGATGAAACTGGTAAAGAATTTGAGGCTGTTTTCATTGGCAATAGAAGTGGACTTAGTGGTGGCTGGAGAGGATTTGCATTGGAGCATAAGTTGGATGATGGTGATGCACTTGTTTTTGAATTGACTGAAAAAACAAGATTTAAGATTTATAGAATTAAAGCATTTCCAGATTCAGCTGAAGAATATGAAAAACAGATTTTGAAGGAAGAAGGAAACAAACGTGCAAAGAAAGCACTGAAAGCTAATAGTAACTCCGAATCAGAATTTGACAAGACAAAAAACCCAAAAAAAGCCATTGCAGATAAAACTAATGAAGTAGAGAGTTCTAAGGATAACCTGCCAGAACGTAACATTGATACTGAAGTTAAACCACAGGAGGTGAAGCTAAGTTATAGAACTAGGTTTACTCGGAAGAAAGTGCAAGATAAATCTAAAGGGGGAACACAAGTTGAAAATGGAGAATCAAAGGAGGCCATGAAGCCTAAATCTCAAGGAAACAAGACAAAAAAGTCAAAAGAAAGTGTTGATCATAAAATCGATAACTCGGACAATACTCAACAGGTTCTTTCCAAAAATAACCCTGTCGGACCAAAAGGTGCGAGCCTAAGCAATGAAGATGGGATTGTTCAGGATGGTGGACCAGTTGAAGAAAACAGCAAAAGTGTTTCAAAACCTAGAAAAATGCGAGCTCCAAAGCTTTTCAGAAAGAGAGTATAG 1239 0.389 MAKGCTNNDYEEARKQRLEENKKRFEDLGISTISKNLSEIASSVKKSPYRSPKPKSKRDVVVEPRRSSRVRNPVRTYREDGDIELPTFRKRSRSSSSWGSYIARPLDEIKEATVEQRARALEAAEKLQSNLQSENPSFIKSMVRSHVYSCFWLGLPLRFCAKHLPKTVCNMILEDETGKEFEAVFIGNRSGLSGGWRGFALEHKLDDGDALVFELTEKTRFKIYRIKAFPDSAEEYEKQILKEEGNKRAKKALKANSNSESEFDKTKNPKKAIADKTNEVESSKDNLPERNIDTEVKPQEVKLSYRTRFTRKKVQDKSKGGTQVENGESKEAMKPKSQGNKTKKSKESVDHKIDNSDNTQQVLSKNNPVGPKGASLSNEDGIVQDGGPVEENSKSVSKPRKMRAPKLFRKRV 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01226 412 SUPERFAMILY DNA-binding pseudobarrel domain 131 226 IPR015300 -
Aip07g01226 412 MobiDBLite consensus disorder prediction 41 70 - -
Aip07g01226 412 ProSiteProfiles B3 DNA-binding domain profile. 138 229 IPR003340 GO:0003677
Aip07g01226 412 Coils Coil 110 130 - -
Aip07g01226 412 CDD B3_DNA 136 224 IPR003340 GO:0003677
Aip07g01226 412 MobiDBLite consensus disorder prediction 329 354 - -
Aip07g01226 412 Coils Coil 8 28 - -
Aip07g01226 412 MobiDBLite consensus disorder prediction 53 70 - -
Aip07g01226 412 MobiDBLite consensus disorder prediction 251 319 - -
Aip07g01226 412 Pfam B3 DNA binding domain 138 222 IPR003340 GO:0003677
Aip07g01226 412 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS05G0481400 4 240 - -
Aip07g01226 412 MobiDBLite consensus disorder prediction 251 412 - -
Aip07g01226 412 Gene3D - 112 229 IPR015300 -
Aip07g01226 412 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 4 240 IPR044837 -
Aip07g01226 412 MobiDBLite consensus disorder prediction 355 373 - -
Aip07g01226 412 SMART B3_2 138 232 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01226 Aip-Chr7 18751434 18760575 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01226 10 228 B3 DNA Binding Superfamily AT5G58280 51.210 6.53e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aip07g01226 B3 2.2e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01226 - - lang:109355714 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01226 07 18751434 18760575 Aip07g01226 07 18751434 18760575 ECH