Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01224 ATGTCTGGTTTGTATAATAATCAGATTTCATCTCATTCATCAATAAGAGCCAATTCACCAAATATAAACATGAGGAACAATTTTGATCTTGATAGCAGTCAATACTTAGCTGAGTTGCTAGCAGAACACCAGAAGCTTGGACCCTTTGTGCAAGTCCTTCCCTTCTGTAGCAGACTCTTAAATCAAGAGATTCTAAAGGTTTCTGGAAAGAATAATGGATTATTGATGCAGAACCAAGGAATTAGTAGTGAATATGAAAACAGAATAATGCAGTTTGGAAGCCACAAACCAACAACTCTTGTGGCTTCTTCAGACATGTCACCAAACTTCACTGGTTGGAACAGCCTGTCACATGAAATGTTAGGTGGAGGACAAGGACTAAATAATAATGTTGATTGGCAAACAGCACCACTTGTCTCAAGTCCTCACATTGTGAAGAAGATTTTACGCTTAGATATTCCTAGTGATAGCTATCCAAATTTCAATTTTGTTGGGAGACTGCTTGGTCCGAGGGGCAATTCACTCAAGAGAGTGGAAGCTACCACAGGTTGCCGTGTATATATCAGAGGGAAAGGTTCAATCAAAGATCTAGACAAGAACTACCTCCCAACATTGTTGATCTAa 624 0.391 MSGLYNNQISSHSSIRANSPNINMRNNFDLDSSQYLAELLAEHQKLGPFVQVLPFCSRLLNQEILKVSGKNNGLLMQNQGISSEYENRIMQFGSHKPTTLVASSDMSPNFTGWNSLSHEMLGGGQGLNNNVDWQTAPLVSSPHIVKKILRLDIPSDSYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDLDKNYLPTLLI 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01224 207 Gene3D K Homology domain, type 1 27 201 IPR036612 GO:0003723
Aip07g01224 207 Pfam Homodimerisation region of STAR domain protein 32 69 IPR032377 -
Aip07g01224 207 PANTHER RNA-BINDING KH DOMAIN PROTEIN 2 201 - -
Aip07g01224 207 Pfam KH domain 157 190 IPR004088 GO:0003723
Aip07g01224 207 PANTHER RNA-BINDING PROTEIN RELATED 2 201 IPR045071 -
Aip07g01224 207 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 151 198 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01224 Aip-Chr7 18728724 18733968 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01224 K14945 - gmx:100778904 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01224 07 18728724 18733968 Aip07g01224 07 18728724 18733968 ECH
Aip01g00224 01 2251351 2262165 Aip07g01224 07 18728724 18733968 PCT