Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01217 ATGGAATTCCAAGGTGGAGAACAATCTAATAATGCCAAACTTGTTAAAGCTCAAAGCCAGATTTGGAATCATACTTTCAGTTTCATAAACTCTATGTCACTGAAATGTGCTGTTGAATTAGGCATACCCGATGCAATACACAATTACGGCAAACCCATGCCCCTCTCACAACTCATTGCTTCATTGCCAATTCATCCGTCAAAAACCTCCTTCATCCATCGCTTGATGAGAATCTTGATCCATTCCGGCATCTTCGTTACCGAAGATGTCACCAATAATAATAACGAGGTTGAAATTGGGTATGTTCTAACTGATTCATGCATTTTCCTACTTAAGAACAACCCCTTCAGTGTGACAACTTTGATTCTGATGAACCTTGGTCCCACCGGGACAAAGGCATGGCATCATTTGTCTGATTGGTTCAAGAACGACGATCTCACAGCATTTGAGACTGCACATGGAATAACGTTTTGGGAGTATATTGACCGCGAGCCTGAATATCGCAAATCCTTCATTGACGGCATGGCAAGTGATGCTCGAGTTGTTAGTAGTCTGTTACTGGATGATAAGTGCAAGGGAGTGTTTGAGGGATTGGAATCGCTGGTTGATGTTGGTGGAGGCACTGGAACTGTTGCAAAGGCCATCGCCGAATCATTCCCAAACTTGAAGTGCTCTGTATTTGATCTCCCATGTGTTGTTGCCGGTTTGCAAGGAACTGACAACCTTAAATACATTGCAGGCGACATGTTTGTTGATCCTATTCCTCCTTCTCATGCAATTTTGTTGAAGTTGATTTTACATGACTGGAACGACGAGGAATGTGTGAAAATATTAAAGAGATGCAAGGAGGCAATCATGCACGAAGACAAAGGAGGGAAGGTCGTTATTATAGACATGGTGGTGGAGGATGATAACAAGAAAGATTATGACCGATCACTTGAAAGTCAGCTCTTCTCTGACATGCTTATGATGGTGTTGTTCAATGGAAAAGAGAGAAATAAAATAGAATGGACTAACATAATTTTTTCTGCTGGTTTTACTCGCTATAAAATAACTCCGATTCATGGATTAATGTCTCTCATTGAGATCTATCCATAG 1098 0.4117 MEFQGGEQSNNAKLVKAQSQIWNHTFSFINSMSLKCAVELGIPDAIHNYGKPMPLSQLIASLPIHPSKTSFIHRLMRILIHSGIFVTEDVTNNNNEVEIGYVLTDSCIFLLKNNPFSVTTLILMNLGPTGTKAWHHLSDWFKNDDLTAFETAHGITFWEYIDREPEYRKSFIDGMASDARVVSSLLLDDKCKGVFEGLESLVDVGGGTGTVAKAIAESFPNLKCSVFDLPCVVAGLQGTDNLKYIAGDMFVDPIPPSHAILLKLILHDWNDEECVKILKRCKEAIMHEDKGGKVVIIDMVVEDDNKKDYDRSLESQLFSDMLMMVLFNGKERNKIEWTNIIFSAGFTRYKITPIHGLMSLIEIYP 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01217 365 PANTHER O-METHYLTRANSFERASE 8 365 IPR016461 GO:0008168
Aip07g01217 365 Gene3D - 4 110 IPR036388 -
Aip07g01217 365 PANTHER ORCINOL O-METHYLTRANSFERASE 8 365 - -
Aip07g01217 365 Pfam Dimerisation domain 32 79 IPR012967 GO:0046983
Aip07g01217 365 Gene3D Vaccinia Virus protein VP39 111 365 IPR029063 -
Aip07g01217 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 363 IPR029063 -
Aip07g01217 365 SUPERFAMILY "Winged helix" DNA-binding domain 12 115 IPR036390 -
Aip07g01217 365 Pfam O-methyltransferase domain 134 346 IPR001077 GO:0008171
Aip07g01217 365 PIRSF O-mtase 2 365 IPR016461 GO:0008168
Aip07g01217 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 365 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01217 Aip-Chr7 18574475 18576485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01217 32 363 Monolignol Biosynthesis Gene Families AT5G54160 32.537 2.05e-48 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01217 - K16040 aip:107609507 477.248