Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01204 ATGGGTTTTGTTGCATCAAGCGATTTCGATGTGAAACTTGAGAAACAAGAAGAAGATGGCTTCTTGATTGCAAAAATGGCATGTTCAGTTGTGGTTCCAATGGCTGTGAGGACCACAATTGAGCTTGGTGTATTTGACATCATGGCCAAAGCAGGCGAAGGTGCAAAGCTTTCAGCAAAAGACATTGTGGACCACATTGGAGCCAACAACCCTGAAGCAGCATCAATGTTGGATCGTCTTCTTAGGCTTCTTGCAAGTCACTCATTACTGCGTTGTTCGGTTGTTGAACATCCAGAAAACCCTAATAACTTGCATCAGAGGCTGTATAGCCTCGCACCTTGTTCCAAATGTTTTGTGAGTGATGCTGATGGTGTGTCTTTGGGACCCTCATTGTTGCTGTCTCTTGATAAAGTCTTCTACGAAAGCTGGAATGAATTGAAAGGAGCTATCCTTGAAGGAGGAACACCATTTAATAGGGCTCATGGCATGCATGTCTTCGAGTATGCAAAGGTTGATGCTAGGTTCAACAAGGTTTTCAATAAAGCAATGCACAACTCCTCCACTGTATTAATGAAGAGGATTCTTGATGTCTATAAAGGCTTTGACCACATCAATAAACTAGTGGATGTTGGTGGTGGTGTTGGGGCAATTATCAAATTGATCACTTCCAAACACCCTTATATCCATGGTATCAATTTTGATTTGCCTCATGTCATAGAATGTGCCTCAGCCTATGATGATGGTGTGGAGCATGTGGGAGGAGATATGTTTGAGAGTGTTCCAAATGGAGATGCCATTTTCATGAAGTGGATACTTCATGATTGGGGCAATGAAGATTGCTTGAAGATATTAAAGAATTGTTACAAGGCTATTCCCAACGATGGAAAGGTGATTGTGATGGACACAATTCTTCCTACTGTTCCTGAGGACACATCTTCTGCCAAGAACGCTTTTAGAAATGATGTTATCATGATGACTCAAATGCCCGGAGGATTTGAGAGAACCCAACAAGATTTCATGAACTTGGCAAATGGATCTGGATTTAGTGGCATAAAATTTGTGTGTTGTGTCTCTAGCTTCTGGGTCATGGAGTTCTACAAGTAA 1104 0.4176 MGFVASSDFDVKLEKQEEDGFLIAKMACSVVVPMAVRTTIELGVFDIMAKAGEGAKLSAKDIVDHIGANNPEAASMLDRLLRLLASHSLLRCSVVEHPENPNNLHQRLYSLAPCSKCFVSDADGVSLGPSLLLSLDKVFYESWNELKGAILEGGTPFNRAHGMHVFEYAKVDARFNKVFNKAMHNSSTVLMKRILDVYKGFDHINKLVDVGGGVGAIIKLITSKHPYIHGINFDLPHVIECASAYDDGVEHVGGDMFESVPNGDAIFMKWILHDWGNEDCLKILKNCYKAIPNDGKVIVMDTILPTVPEDTSSAKNAFRNDVIMMTQMPGGFERTQQDFMNLANGSGFSGIKFVCCVSSFWVMEFYK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01204 367 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 14 367 - -
Aip07g01204 367 SUPERFAMILY "Winged helix" DNA-binding domain 17 121 IPR036390 -
Aip07g01204 367 PIRSF O-mtase 1 367 IPR016461 GO:0008168
Aip07g01204 367 PANTHER O-METHYLTRANSFERASE 14 367 IPR016461 GO:0008168
Aip07g01204 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 366 IPR029063 -
Aip07g01204 367 Gene3D - 5 117 IPR036388 -
Aip07g01204 367 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 367 IPR016461 GO:0008168
Aip07g01204 367 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
Aip07g01204 367 Pfam O-methyltransferase domain 143 349 IPR001077 GO:0008171
Aip07g01204 367 Gene3D Vaccinia Virus protein VP39 119 367 IPR029063 -
Aip07g01204 367 CDD AdoMet_MTases 206 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01204 Aip-Chr7 17989552 17993117 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01204 1 367 Monolignol Biosynthesis Gene Families AT5G54160 48.774 2.96e-123 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01204 K13066 - gmx:100789402 448.743