Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01201 ATGGCTCCTGCATCAGAATCCAATGCAAAGCTACTTGAGATCCTCAAGCTACCACAAGATGAAGAAGAAGTAGATGTCTTCTTGTTTTCTCAAATGGCATGGTCAATTGTGGTTCCAATGGTTGTGAGGACCACAATAGAGCTTGGTGTATTTGACATCATAGCAAAAGAAGGCAAAGGTGCAAAGCTCTCAGCAAAAGATATTGCGGATCACATTGGAAGCAACAACCCTGAAGCAGCATCAATGTTGGATCGTCTTCTTAGGCTTCTTGCAAGTCATTCATTACTGTCTTGTTCTGTTGTTAAAGATCCAGTAGAAAGCTCTAATAACTTGCATCAGAGGCTGTATAGCCTCTCACCTGTTTCCAAATATTTTGTGGGTGATGCTGATGGTGTATCTTTGGGACCTTCCTTGTTGCTGCATCTAGATAAAGTCTTTACCCAAAGTTGGTTCAACGAGGTCTTCAACAAAGCAATGCACAACTCCTCCACTTTATTAATGAAGAGGATTCTTGATGTCTACAAAGGCTTCGACCACATCAATAAACTAGTGGATGTTGGTGGTGGTGTTGGGGCAACTATCAAATTAATCACTTCCAAACACCCTCATATTCTTGGTATCAATTTTGATTTGCCTCATGTCATAGAATGTGCCTCAGCCTATGATGATGCCGTGGAACACGTGGGAGGAGATATGTTTGAGAGTGTTCCTAATGGAGATGCCATTTTCATGAAGTCTTCAATGTCGTTTGAGGAGAGAAGTGAGACATCGTGGGTGTGGAAGGCATCGTCGGAGAAAGAGAAGGGAATGGCGGTGTCATCAGAGAAGAGAAGGGAGACACCATGGGTGTGA 852 0.4296 MAPASESNAKLLEILKLPQDEEEVDVFLFSQMAWSIVVPMVVRTTIELGVFDIIAKEGKGAKLSAKDIADHIGSNNPEAASMLDRLLRLLASHSLLSCSVVKDPVESSNNLHQRLYSLSPVSKYFVGDADGVSLGPSLLLHLDKVFTQSWFNEVFNKAMHNSSTLLMKRILDVYKGFDHINKLVDVGGGVGATIKLITSKHPHILGINFDLPHVIECASAYDDAVEHVGGDMFESVPNGDAIFMKSSMSFEERSETSWVWKASSEKEKGMAVSSEKRRETPWV 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01201 283 Gene3D - 37 170 IPR036388 -
Aip07g01201 283 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 151 246 - -
Aip07g01201 283 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 150 - -
Aip07g01201 283 PANTHER O-METHYLTRANSFERASE 1 150 IPR016461 GO:0008168
Aip07g01201 283 Gene3D Vaccinia Virus protein VP39 152 246 IPR029063 -
Aip07g01201 283 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 248 IPR029063 -
Aip07g01201 283 SUPERFAMILY "Winged helix" DNA-binding domain 21 128 IPR036390 -
Aip07g01201 283 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 283 IPR016461 GO:0008168
Aip07g01201 283 Pfam Dimerisation domain 40 91 IPR012967 GO:0046983
Aip07g01201 283 PANTHER O-METHYLTRANSFERASE 151 246 IPR016461 GO:0008168
Aip07g01201 283 Pfam O-methyltransferase domain 147 246 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01201 Aip-Chr7 17848673 17851772 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01201 28 245 Monolignol Biosynthesis Gene Families AT5G54160 45.600 1.08e-65 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01201 K13066 - aip:107606823 272.322