Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01199 ATGGCTCCCGCATCAGAATCCGATGCAAAACTACTTGAGCTCCTCAAGCTACCACAAGATGAAGAAGAAGTAGATGGCTTCTTGTTTTCTCAAATGGCATGGTCAATTGTGGTTCCAATGGCTTTGAGAACCACAATAGAGCTTGGTGTATTTGACATCATAGCAAAAGAAGGCGAAGGTGCAAAGCTCTCAGCAAAAGACATTGTGGATGACATTGGAACCAAAAACCCTGAAGCAGCATCAATGTTGGATCGTGTTCTTAGGCTTCTTGCAAGTCACTCATTACTGTCTTGTTCTGTTGTTGAAGATCCACAAAGCTCTAATAACTTGCATCAGAGGCTGTATAGTCTCTCCCCTGTTTCCAAATATTTTTTGGGTGATGCTGATGGTGTATCTTTGGGACCCTCGTTGTGGCTGCATCTAGATAAAGTCTTCACCCAAAGCGTGGAGCATGTGGGAGGAGATATGTTTGAGAGTGTTCCTAATGGAGACGCCATTTTCATGAAGACAATACTTCATGATTGGGGAGATGAAGAATGCTTGAAGATATTGAAAAATTGCCTCAAGGCTATTCCGAATGATGGGAAGGTTATTGTGGTGGAAACAATGGTTTCCATTTTTCCTGAGCCAACATCTTTTGCCGAGAATGCTTTTAGAAATGATGTTATCATGATGACTCAAATGCTCGGAGGGATTGAGAGAACAAAACAAGATTTCATGGACTTAGCAAATGGATCTGGATTTAGTGGCATAAGATTTGTGTGTTGTGTCTCTAGCTTCTGGGTCATGGAGTTCTACAAGTAA 804 0.4179 MAPASESDAKLLELLKLPQDEEEVDGFLFSQMAWSIVVPMALRTTIELGVFDIIAKEGEGAKLSAKDIVDDIGTKNPEAASMLDRVLRLLASHSLLSCSVVEDPQSSNNLHQRLYSLSPVSKYFLGDADGVSLGPSLWLHLDKVFTQSVEHVGGDMFESVPNGDAIFMKTILHDWGDEECLKILKNCLKAIPNDGKVIVVETMVSIFPEPTSFAENAFRNDVIMMTQMLGGIERTKQDFMDLANGSGFSGIRFVCCVSSFWVMEFYK 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01199 267 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 148 - -
Aip07g01199 267 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 148 267 - -
Aip07g01199 267 Gene3D - 11 124 IPR036388 -
Aip07g01199 267 Pfam O-methyltransferase domain 141 249 IPR001077 GO:0008171
Aip07g01199 267 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 267 IPR016461 GO:0008168
Aip07g01199 267 Pfam Dimerisation domain 40 91 IPR012967 GO:0046983
Aip07g01199 267 PANTHER O-METHYLTRANSFERASE 1 148 IPR016461 GO:0008168
Aip07g01199 267 PANTHER O-METHYLTRANSFERASE 148 267 IPR016461 GO:0008168
Aip07g01199 267 Gene3D Vaccinia Virus protein VP39 138 266 IPR029063 -
Aip07g01199 267 SUPERFAMILY "Winged helix" DNA-binding domain 27 127 IPR036390 -
Aip07g01199 267 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 148 266 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01199 Aip-Chr7 17704335 17754952 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01199 145 267 Monolignol Biosynthesis Gene Families AT1G77520 50.000 3.62e-35 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01199 K13066 - aip:107606823 496.893