Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01197 ATGGCTCTTGCATCACATGATTCCGATGCAAAACTTGAGAAACAAGAAGATGATGCCTTTATGTTTGCGCAAATGGCATGTTCAGTTGTGGTTCCAATGGCTGTGAGGACCACAATAGAGCTTGGTGTATTTGAGATCATAGCAAAAGAAGGCGAAGGTGCAAAGCTCTCAGCAAAAGACATTGTGGATCGCATTGGAAGCAACAACCCTGAAGCAGCATCAATGTTGGATCGTGTTCTAAGGCTTCTTGCAAGTCATTCATTACTGTCTTGTTCTGTTGTTGAAGATCCAGAAAGCTCTAATAACTTGCACCACAGGCTACTGTATAGCCTCTCACCTGTTTCCAAATACTTTGTGACTGATGCTGATGGTGTGTCTTGGGGACCCTCTTTGGCGCATCTTCTGGATAAAGTCTTATATCCATGCTGGAGTGAACTAAAAGGAGCGATCTTAGAAGGAGGTATACCATTCAACAGGGTTTATGGTATGAATATGTTCGAGTATGCAAATATTGATCCACGGTTCAACGAGATTTTCAACAAAGCTATGCTCACATCCTCCACTATATCAATGAAGAGGATTCTTGATGTCTACAAAGGCTTCGACCACATCAATAAACTGGTTGACGTTGGTGGCGGTCTTGGGGCCACTCTCAACTTGATCACTTCCAAATACCCTAATATCCAGGGTGTCAATTTTGATTTGCCTCATGTTATAGAAAATGCCCCCATCTATGCTGGTGTGGAGCACATAGGCGGAGATATGTTCGAGAGCGTTCCCAACGGGGATGCAATTTTTATTAAGAACATACTTCATGATTGGGATGACGAAGGATGCTTGAAGATATTAAAGAATTGTCGGAAGGCTATACCGAATGATGGGAAGGTGATTGTGGTGGACAAAATTCTTCCTGCAATGCCAGAGCAGACAGACTTTGCTAAGATGACTTTCAGGTCTGATGTTTTCATGATGATTCAAATGTCAAAAGGAAAGGAACGAACCCTCCAAGATTTCATGCATTTGGCCAAAGCATCTGGATTTAGTAGCATAACATTGATTTGTAATGTATCCAGCTTATGGGTCATGGAGTTCTTCAATCAGTAG 1104 0.4221 MALASHDSDAKLEKQEDDAFMFAQMACSVVVPMAVRTTIELGVFEIIAKEGEGAKLSAKDIVDRIGSNNPEAASMLDRVLRLLASHSLLSCSVVEDPESSNNLHHRLLYSLSPVSKYFVTDADGVSWGPSLAHLLDKVLYPCWSELKGAILEGGIPFNRVYGMNMFEYANIDPRFNEIFNKAMLTSSTISMKRILDVYKGFDHINKLVDVGGGLGATLNLITSKYPNIQGVNFDLPHVIENAPIYAGVEHIGGDMFESVPNGDAIFIKNILHDWDDEGCLKILKNCRKAIPNDGKVIVVDKILPAMPEQTDFAKMTFRSDVFMMIQMSKGKERTLQDFMHLAKASGFSSITLICNVSSLWVMEFFNQ 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01197 367 PANTHER O-METHYLTRANSFERASE 13 365 IPR016461 GO:0008168
Aip07g01197 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 363 IPR029063 -
Aip07g01197 367 Gene3D Vaccinia Virus protein VP39 119 366 IPR029063 -
Aip07g01197 367 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 13 365 - -
Aip07g01197 367 Gene3D - 3 118 IPR036388 -
Aip07g01197 367 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 366 IPR016461 GO:0008168
Aip07g01197 367 PIRSF O-mtase 1 366 IPR016461 GO:0008168
Aip07g01197 367 Pfam Dimerisation domain 33 84 IPR012967 GO:0046983
Aip07g01197 367 Pfam O-methyltransferase domain 143 348 IPR001077 GO:0008171
Aip07g01197 367 SUPERFAMILY "Winged helix" DNA-binding domain 16 121 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01197 Aip-Chr7 17637774 17653785 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01197 16 367 Monolignol Biosynthesis Gene Families AT5G54160 49.858 8.34e-123 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01197 K13066 - gmx:100789402 461.455