Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01196 ATGGCCCTTGCATCAGATTCCAATGGGGAACCCCAAAAGTACTACCTCAAACCAGAAATTGATGATCAAGAACAAGAACAAGAGGATGGGTTCTTGATTGCAAGGCAAATAACAAGTTCATCAGTTGTGGTTCCAATGGTTTTGAGGACAGCCATAGAGCTTGGTGTATTTGAGATCATAGCAAAAGAAGGCGAAAGTGCAAAGCTCTCAGCAAAAGGCATTGTGGATCACATTGGAACCAACAACCCTGAAGGAGCATCAATGTTGGATCGTCTTCTTAGGCTTCTTGCAAGTCTAGCCTTTTAA 306 0.4281 MALASDSNGEPQKYYLKPEIDDQEQEQEDGFLIARQITSSSVVVPMVLRTAIELGVFEIIAKEGESAKLSAKGIVDHIGTNNPEGASMLDRLLRLLASLAF 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01196 101 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 19 99 - -
Aip07g01196 101 SUPERFAMILY "Winged helix" DNA-binding domain 26 99 IPR036390 -
Aip07g01196 101 Gene3D - 9 101 IPR036388 -
Aip07g01196 101 Pfam Dimerisation domain 46 97 IPR012967 GO:0046983
Aip07g01196 101 PANTHER O-METHYLTRANSFERASE 19 99 IPR016461 GO:0008168
Aip07g01196 101 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01196 Aip-Chr7 17613541 17613879 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01196 28 100 Monolignol Biosynthesis Gene Families AT5G54160 43.836 1.20e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01196 K13066 - aip:107606823 87.8113