Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01195 ATGGCTCTTGCATCAAATGTTTCCGATGCAAAACTTGAGAAACAAGAAGATGATGCCTTTTTGTTTGCACAAATGGCATGTTCAATTGCGGTTCCAATGGCTGTGAGGACCACAATAGAGCTTGGTGTATTTGAGATCATAGCAAAAGAAGGCGAAGGTGCAAAGCTCTCAGCAAAAGACATTGTGGATCGCATTGGAAGCAACAACCCTGAAGCAGCATCAATGTTGGATCGTGTTCTAAGGCTTCTTGCAAGTCATTCATTACTGTCTTGTTCTGTTGTTGAAGATCCAGAAAGCTCTAATAACTTGCACCACAGGCTACTGTATAGCCTCTCACCTGTTACATATATATATATGGTGAATAGTCTATGCATGATTTACGATAGGATCTTTCTTTTTTTAATTGGTGTGTTTTTAATTATCAGGGGTGAACTGAAAGGAGCAATCTTAGAAGGAGGTATACCATTCAACAGGATTTATGGTATGAATGTGTTCGAGTATGCAAATATTGATCCACGGTTCAACGAGGTTTTCAACAAAGCTATGCTCACATCCTCCACTATATCAATGAAGAGGATTCTTGATGTCTACAAAGGCTTCGACCACATCAATAAACTGGTTGACGTTGGTGGCGGTCTTGGGGCCACTCTCAACTTGATCACTTCCAAATACCCTAATATCCAGGGTGTCAATTTTGATTTGCCTCATGTTATAGAAAATGCTCCCATCTATGCTGGTGTGGAGCACATAGGCGGAGATATGTTCGAGAGCGTTCCCAACGGGGATGCCATTTTTATTAAGAATTGCCGGAAGACTATACTGAATGATGGGAAGGTGATTGTGGTAGACAAAGTTCTTCTTGCAGTGCCAGAGCAGACAAATGTTGCTAAGATGGCTTCCAGGTCTGATGTTTTCATGATGATTCAAACGCTAAAAGGAAAGGAACGAACCCACCAAGATTTCATGCATTTGGCCAAAGCATCTGGATTTAGTAGCACAACATTGCTTTGTAATGTATCCAGCTTATGGGTCATGGAGTTCTTCAATCAGTAG 1053 0.4122 MALASNVSDAKLEKQEDDAFLFAQMACSIAVPMAVRTTIELGVFEIIAKEGEGAKLSAKDIVDRIGSNNPEAASMLDRVLRLLASHSLLSCSVVEDPESSNNLHHRLLYSLSPVTYIYMVNSLCMIYDRIFLFLIGVFLIIRGELKGAILEGGIPFNRIYGMNVFEYANIDPRFNEVFNKAMLTSSTISMKRILDVYKGFDHINKLVDVGGGLGATLNLITSKYPNIQGVNFDLPHVIENAPIYAGVEHIGGDMFESVPNGDAIFIKNCRKTILNDGKVIVVDKVLLAVPEQTNVAKMASRSDVFMMIQTLKGKERTHQDFMHLAKASGFSSTTLLCNVSSLWVMEFFNQ 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01195 350 Gene3D Vaccinia Virus protein VP39 124 349 IPR029063 -
Aip07g01195 350 Gene3D - 3 116 IPR036388 -
Aip07g01195 350 SUPERFAMILY "Winged helix" DNA-binding domain 16 115 IPR036390 -
Aip07g01195 350 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 13 348 - -
Aip07g01195 350 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 144 346 IPR029063 -
Aip07g01195 350 PIRSF O-mtase 1 349 IPR016461 GO:0008168
Aip07g01195 350 Pfam O-methyltransferase domain 144 331 IPR001077 GO:0008171
Aip07g01195 350 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 350 IPR016461 GO:0008168
Aip07g01195 350 Pfam Dimerisation domain 33 84 IPR012967 GO:0046983
Aip07g01195 350 PANTHER O-METHYLTRANSFERASE 13 348 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01195 Aip-Chr7 17596638 17613170 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01195 16 350 Monolignol Biosynthesis Gene Families AT5G54160 43.611 6.30e-97 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01195 K13066 - ahf:112762943 413.305