Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01193 ATGAGCAGGAGTGAATTGAAAGGAGCAATCCTTGAAGGAGGTATACCATTCAATAGGGCTCATGGCATGCATGTCTTTGAGTATGCAAAGATTGATCCTAGGTTCAACGAGGTTTTCAATAAGACTATGGTCAACTCCTCCACTATATTAATGAAGAGGACTCTTGATCTCTACAATGGATTTGAGCACATTAATAAACTAGTGGATGTTGGTGGTGGTGTCGGGAACCATCTTAAATTGATCACTTCTAAATACCCTCATATTCATGGTATCAATTTTGATTTGCCTCATGTCATAGAATGTGCTCCCCTCTATACTGGTGTGGAGCACGTGGGAGGAGATATGTTTGAGAGTGTTCCTAATGGAGATGCAATTTTCATAAAGGTGAGGGAATAA 396 0.4015 MSRSELKGAILEGGIPFNRAHGMHVFEYAKIDPRFNEVFNKTMVNSSTILMKRTLDLYNGFEHINKLVDVGGGVGNHLKLITSKYPHIHGINFDLPHVIECAPLYTGVEHVGGDMFESVPNGDAIFIKVRE 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01193 131 Gene3D Vaccinia Virus protein VP39 2 129 IPR029063 -
Aip07g01193 131 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 131 IPR016461 GO:0008168
Aip07g01193 131 PANTHER O-METHYLTRANSFERASE 2 128 IPR016461 GO:0008168
Aip07g01193 131 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 2 128 - -
Aip07g01193 131 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 5 127 IPR029063 -
Aip07g01193 131 Pfam O-methyltransferase domain 5 128 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01193 Aip-Chr7 17579408 17580377 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01193 6 128 Monolignol Biosynthesis Gene Families AT5G54160 67.480 2.69e-55 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01193 K13066 - ahf:112762939 264.233