Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01180 ATGTTTGGAATTGAGGGGAAGTTAGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTCGTCGACAGGGAGAATGATATTCTTCTCCTTGGGGACGATCCATGGGAATCATTTGTCAACAATGTTTGGTATATCAAAATACTTTCACCTGAGGATATTCAGAAGATGGGAGAACAAGCCGTAGAGTCTCGTGACGGTGCAAAGGATGCTAGTTCAGTAGTTAGTTGGGTTTCACTGTCGGAAGGGGCCATCAAATTCAATGTGGATGGAAGTTCAAGAGGAAATCCAGGAAGAGCAGATGTGGCGGCTTGCTTAGAGATCAAGATGGCAACTGTATCGCCGGATTTAAAGGTGGAATGTGAAAGTGATTGCATGGTGGCTCTGAAGATTATTCATGATAATGCCGAAGACTTTCCAGAACTCGCACACATTGTTGAAGAAATTCATCAGTTCATGCTTCTTGACTGGGACGTCACTATCTATCATATCATGAGGGAAGGAAATTCATGTGCTGATTTTTTGGCAAAGATCGGTTCTTCTTCAAATTCTACGTTTTTGGTTATGATCAGCCCTCCGCCGGAACTCACTCTTCTTCTTCTTGCCAACTTCAAGGCTAAAGTAGTGGATGAAGTATCCCAAAAGTTGAATCGCATTCCGCTAAATGTAGCTAGACACCCTGTTGGACTCCAAGCTCGTGTATCAGAAGTATACTCACTGTTAGAACCTGGATCTGATGATGTTAGAATGGTTGGAATTTATGGCATTGGTGGAATTGGTAAAACAACTATTGCAAAAGCTGTTTATAACACACTATGTGTTGAAAGGTGCACTGAGCTGAAGAACTTACCTAGTGTCCTAAAGTTGCCATCTTTAGGATGCATTGCTCTTAACGGTTGTTGTCAACTTGAGAAGTTTCCAGAATTGTTGGGAGAAATGGAAAATTTGAGAATTCTTAAGGTGGAAGAGACCGCAATATAA 978 0.4192 MFGIEGKLEDPLRSGWQLVFVDRENDILLLGDDPWESFVNNVWYIKILSPEDIQKMGEQAVESRDGAKDASSVVSWVSLSEGAIKFNVDGSSRGNPGRADVAACLEIKMATVSPDLKVECESDCMVALKIIHDNAEDFPELAHIVEEIHQFMLLDWDVTIYHIMREGNSCADFLAKIGSSSNSTFLVMISPPPELTLLLLANFKAKVVDEVSQKLNRIPLNVARHPVGLQARVSEVYSLLEPGSDDVRMVGIYGIGGIGKTTIAKAVYNTLCVERCTELKNLPSVLKLPSLGCIALNGCCQLEKFPELLGEMENLRILKVEETAI 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01180 325 Gene3D - 212 280 IPR027417 -
Aip07g01180 325 PANTHER AUXIN RESPONSE FACTOR 1 65 - -
Aip07g01180 325 SUPERFAMILY Ribonuclease H-like 84 183 IPR012337 -
Aip07g01180 325 CDD RNase_H_like 87 176 IPR044730 -
Aip07g01180 325 Pfam Reverse transcriptase-like 117 176 IPR002156 GO:0003676|GO:0004523
Aip07g01180 325 Gene3D - 101 184 IPR036397 GO:0003676
Aip07g01180 325 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 65 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aip07g01180 325 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 213 272 IPR027417 -
Aip07g01180 325 ProSiteProfiles PB1 domain profile. 1 52 IPR000270 GO:0005515
Aip07g01180 325 Gene3D - 1 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01180 Aip-Chr7 17220108 17224504 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01180 1 60 B3 DNA Binding Superfamily AT5G37020 85.000 7.84e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01180 - - adu:107458034 141.739