Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01148 ATGGCACCAGTTTCATTACCCCCAGGTTTCAGGTTCCATCCAACCGATGAAGAACTTGTTGCTTATTACCTCAAAAGGAAGATCAATGGCCGTAAGATTGAGTTGGAGATCATTGCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTGCCAGGGAAGTCATTGTTACCGGGGAAGGATTTGGAGTGGTATTTCTTTAGTCCTCGAGATAGGAAGTATCCAAATGGGTCAAGAACGAACCGTGCAACAAAATCTGGGTATTGGAAGGCGACAGGGAAGGACAGAAAAGTAAATTCACAATGTCGTGCTGTGGGTATGAAGAAAACCCTAGTTTACTATCGTGGAAGGGCACCTCATGGCTCTCGCACTGATTGGGTTATGCATGAATATCGTCTTGATGATAGAGAATGTGAAAATGCTTCTTCTGGCTTGCAGGATGCATATGCACTTTGTCGTGTGTTCAAGAAGAGTGCAGTGATAACCCCTAAAGTTGATGAGGAACATCATCATCACCATCACTATGTTAATGCTAATAATCACAATAATAGCAGCCATGCTTTGCCAATTACAAGTGATCAATCGTCAAGTATGGAGTTATATTCTGAAGGAAGGGGTGAAGATTTGGATAATAGCTCTAATTATTTGGTTCCCATCGATACTACTTGCACACTACCCCTCAACAACATGGTGATGAACAATAATAATAGTGATGCTTCTTTCAATAGTAGGGATAATAATGGGAAATGGTCACAATTTGTTTCAGAAGATCCATTGTTCAGCTTTCCAACTTCCTCCTCATCATTTGCTAATAGTTATGGATCTATAACATATCCTCCATCCAAGGTGGATATAGCACTAGAGTGTGCAAGGATGCAACATAGGTTCACCATGCCTCCATTGGAGGTAGAGGACTTCCCTCATGTTGGAACCTCGGAGCTGAAAATGACAGAATTAACCTCGGGTGCCGCATCCGCCGTGCACGGAACCCGAAACGAAACGGATATCTTGCAGGAAATTCTTTCGGTTGCTCATGCTTCCCAGGAGTTGATAAACCACTCCAGCTACTCATCATCATGGGGTGGTGATGGTGGTGGCAACCATGAAAATTGTGCAACTCATGGAGATGATTTCACTTTCATGGTTGGTAGCACTAACTACAATAATAATAATTTGAATGACATTAACTCCATGAGATATGTTGATAGAAATTGGGAAGATCCAAACAGTTCAAGATCCATTGATATTGGATATTTGGATGAAGAATTTAAGGGAGAGAGGATGGTAGAGAATTTAAGATGGGTTGGAATGTCTACAAAAGATTTAGAAAAGAACTTCACGGAAGAGCAAAAGATTGTTCCAATAGAGGATATATCAAGCTTCCGGACAAATAATAAAGAAGAAAATGAGGTGCAAGAATCTGAGCAACACCATAGCAACAAGGAACTATTGATCAATGATTTCTCATTAGGGTTCAACCCTAATAACAACAACAGCGAGAACTTTCTAGATGATGATCATAACAACATGGATAACGATGATTACTCAAGTTCTCCAAGCTTTGAAGTCATTGAGGAAATAAGGGTCAGCCATGGATCAATGTTTGTTTCGACTCGCCGCGTCGCTGACACATTCTTCCACCAAATAGTTCCTTCACAAACCGTCCAGGTTCACCTCCTCAATCCAGTGATAACAAGCAATGAAGAAGAGACATTGATGATGATAATGGAGAGGAATCAAGGGTATTTCGGGGATTTTCTTTTCAGGACAATAGCAACTGCGTTTGTGTTCATCTTTGCACTTGTATTCGTGCATTGTGATTATTTGAAGGAAGAAGTGGAATTGGTGAAGAGAAAGAGATCATCACAATCATCATCTAAGATCATGAAATGGAGCAACAATAATAAGaaaagaaaacgcgtGGGGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCGCCTCGCCCTCGCGCCGCCGCCGTGCCCTCGCGCCTCGCCCTCCTCGTCGAGCCGTTTCTGCTCCTCCTCCTCGCCCTCGTCGTCGCCGCCTCGCCCTCATCGTCGCGCCGTAACCTCGTCGTCACCGCCGCCTCCTCCAGAACTCTGATGATAATTTTCTGGGTTATGGGTTCTGATGATGATGATGATTTTCTGAGTTGA 2214 0.4119 MAPVSLPPGFRFHPTDEELVAYYLKRKINGRKIELEIIAEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQCRAVGMKKTLVYYRGRAPHGSRTDWVMHEYRLDDRECENASSGLQDAYALCRVFKKSAVITPKVDEEHHHHHHYVNANNHNNSSHALPITSDQSSSMELYSEGRGEDLDNSSNYLVPIDTTCTLPLNNMVMNNNNSDASFNSRDNNGKWSQFVSEDPLFSFPTSSSSFANSYGSITYPPSKVDIALECARMQHRFTMPPLEVEDFPHVGTSELKMTELTSGAASAVHGTRNETDILQEILSVAHASQELINHSSYSSSWGGDGGGNHENCATHGDDFTFMVGSTNYNNNNLNDINSMRYVDRNWEDPNSSRSIDIGYLDEEFKGERMVENLRWVGMSTKDLEKNFTEEQKIVPIEDISSFRTNNKEENEVQESEQHHSNKELLINDFSLGFNPNNNNSENFLDDDHNNMDNDDYSSSPSFEVIEEIRVSHGSMFVSTRRVADTFFHQIVPSQTVQVHLLNPVITSNEEETLMMIMERNQGYFGDFLFRTIATAFVFIFALVFVHCDYLKEEVELVKRKRSSQSSSKIMKWSNNNKKRKRVGEXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRPRAAAVPSRLALLVEPFLLLLLALVVAASPSSSRRNLVVTAASSRTLMIIFWVMGSDDDDDFLS 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01148 737 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Aip07g01148 737 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Aip07g01148 737 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 409 - -
Aip07g01148 737 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Aip07g01148 737 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 409 - -
Aip07g01148 737 MobiDBLite consensus disorder prediction 496 515 - -
Aip07g01148 737 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Aip07g01148 737 MobiDBLite consensus disorder prediction 168 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01148 Aip-Chr7 16472118 16483034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01148 1 606 NAC Transcription Factor Family AT1G65910 48.095 5.25e-165 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip07g01148 NAM 2.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01148 - - gmx:100809019 723.776