Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01136 ATGGTGTTGCCTCAATCGACATGCAATCTCATGTCAGCAAAGAATAAGCAAGTGGCCCAACCTGAAATCCAGAAGCCTAGATGGCTTGATGCTTTCCTGAGAAACAAGTTTTTTGAGCAGTGCAAGGATCATCCACAGCGCAAGAATGAGTTGAACAAATACTGTATAGACTGTGATCAGGCAGTTTGCCAGTATTGCATTTCATTAGGTCATCAAGACCACATCACACTTAAGGTCTACAGACATGTTTACAAAGATGTTGTCTCCATTGGTACTATGGATAAGTATATTGACTGCTCAGAAATTCAGCGCTACAAATCCAACAAGCGATTGGTTATTTCTCTGAATCCTCTCCCGCACAGTGGTTCGACATCAAACAATGAGGCATCATGCAATACCTGCACAAGAAAGTTGAATGAACCGAATCTATATCGCTACTGCTCCATTTCTTGCAAGGTTAAAGCTATTTCGCCAGAACCTAATGATTTGGTTCCTGCCGTAATTCCTGACCAGAACCAGAATGCTCCTCAGGAAGGAATGGATATTCCTACTCAGGAAAGACCAGAGGCAAATGCCGAATTCCCAAGGCCACGAAAGAGAAGAAGAAAGGGAACACCACATCGAGCTCCATTCTTCTAA 639 0.4304 MVLPQSTCNLMSAKNKQVAQPEIQKPRWLDAFLRNKFFEQCKDHPQRKNELNKYCIDCDQAVCQYCISLGHQDHITLKVYRHVYKDVVSIGTMDKYIDCSEIQRYKSNKRLVISLNPLPHSGSTSNNEASCNTCTRKLNEPNLYRYCSISCKVKAISPEPNDLVPAVIPDQNQNAPQEGMDIPTQERPEANAEFPRPRKRRRKGTPHRAPFF 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01136 212 MobiDBLite consensus disorder prediction 197 212 - -
Aip07g01136 212 Pfam PLATZ transcription factor 81 153 IPR006734 -
Aip07g01136 212 MobiDBLite consensus disorder prediction 170 212 - -
Aip07g01136 212 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 11 212 - -
Aip07g01136 212 ProSiteProfiles Zinc finger B-box type profile. 41 79 IPR000315 GO:0008270
Aip07g01136 212 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 11 212 - -
Aip07g01136 212 Gene3D Classic Zinc Finger 34 94 - -
Aip07g01136 212 SUPERFAMILY B-box zinc-binding domain 39 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01136 Aip-Chr7 16174080 16176851 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Aip07g01136 PLATZ 9.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01136 - - adu:107457969 426.787