Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01128 ATGCCGTTAGAAGGGATTTTCATGGAAGCAAGTTCATCAACCACACCTACCCCTGATCTTTCCCTTCAAATAAGCCCTCCAACTATCTCTTCTTCTTCATCTTCTTTGATCTGCAAGGGTAGTAGTAGTAGTAGCAGTAATAATCATAATAATAATAATAATAATAACTTCCCTGAGCTTTCTCTTGGAAGCAATTTCATCAATTATTCAAATAGCAGCAGCAACAACAACAACAGTTATTATAGAGCGATTAGTGGTGCTCATCATCACATAAATTACGGAGGAGTTTCACTTCTTGATGCATCTGACGGTGGAGGAGTGTTAAGGAGGCCAATCAAGGGTATTCCGGTGTATCACAACCGTTCGTTTCCCTTCATGGCAACATCATCATCACCGTCAACAATGGAATATTCTAGAGAAAACAACAAGGTTAATATGTGTTCATATCACCACCACCAATACATGATTCCTTCTTCATCACCTTCATCTATATCACTACCTAATAATAATAGTAATTACTTTATTGGACCCGCACCTTCTTCTTCTTCTTCTTCTTCGCCGGCTTTGGATCCAATCACAAGGCTCAGTGCCTTCAAATCTCATCATCATCCATTGCACCATCATCATCATGAAGTAGCAGCATCGCATCATCATCATCATCATCATCATGCTGGGTTTATGATGCGATCCAGCAGGTTCTTGCCCAAGCTACCTACAAAGAGGAGCATGAGAGCGCCCAGAATGAGGTGGACAAGCACCCTCCATGCCCGATTTGTTCATGCTGTTGAGCTTCTTGGCGGCCATGAAAGAGCAACTCCAAAGTCAGTTCTTGAACTCATGGATGTGAAGGATCTCACATTAGCCCATGTCAAAAGCCATTTGCAGATGTATAGAACTGTTAAGACCACTGACAAGCCTGCAGCTTCTTCAGATGGATCCGGGGACGATGACATGTCACCGGTGGGCGGCAGCGGTGACTGTAGTGGCAGTCTCCGGCAATTTTCGGACCAAAGAGGGCGGCCGGATCGGTCATTATTGCAACAAGATATGGACTACTCTTCCACCACCACCACCACTCTGTGGAGTAACTCTTCAAGTTGTAGAGAGACATGGCAACAAACTACATCTGATATAAATGGTCTAAGACAACCTATCTTACACTCTCAAACAAAATCGGGAGGGCAAAATAGTCATATTCAGGAGTGCGATTCAATGCAACTAAAGAACAATTTGCAAGGTTCTAATAATTTGGAATGCAAGAACCCATGCTTGGAGTTCACATTAGGCAGACCTGATTGGAATGGCAAAGAACAAGCCTAA 1320 0.4311 MPLEGIFMEASSSTTPTPDLSLQISPPTISSSSSSLICKGSSSSSSNNHNNNNNNNFPELSLGSNFINYSNSSSNNNNSYYRAISGAHHHINYGGVSLLDASDGGGVLRRPIKGIPVYHNRSFPFMATSSSPSTMEYSRENNKVNMCSYHHHQYMIPSSSPSSISLPNNNSNYFIGPAPSSSSSSSPALDPITRLSAFKSHHHPLHHHHHEVAASHHHHHHHHAGFMMRSSRFLPKLPTKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSDGSGDDDMSPVGGSGDCSGSLRQFSDQRGRPDRSLLQQDMDYSSTTTTTLWSNSSSCRETWQQTTSDINGLRQPILHSQTKSGGQNSHIQECDSMQLKNNLQGSNNLECKNPCLEFTLGRPDWNGKEQA 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01128 439 MobiDBLite consensus disorder prediction 1 56 - -
Aip07g01128 439 MobiDBLite consensus disorder prediction 8 56 - -
Aip07g01128 439 MobiDBLite consensus disorder prediction 301 350 - -
Aip07g01128 439 Gene3D - 245 302 - -
Aip07g01128 439 MobiDBLite consensus disorder prediction 201 223 - -
Aip07g01128 439 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 66 IPR044847 GO:0000976|GO:0006355|GO:0010158
Aip07g01128 439 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 79 439 IPR044847 GO:0000976|GO:0006355|GO:0010158
Aip07g01128 439 SUPERFAMILY Homeodomain-like 243 299 IPR009057 -
Aip07g01128 439 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 66 - -
Aip07g01128 439 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 79 439 - -
Aip07g01128 439 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 246 299 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01128 Aip-Chr7 16007978 16015810 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01128 228 436 G2-like Transcription Factor Family AT5G16560 60.274 2.09e-70 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aip07g01128 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01128 - - lja:Lj0g3v0089499.2 360.147