Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01119 ATGGTTCTTTCGGAAACCGCTACCGGCACCGATGTCTCAGTCCACTCTACCTTCGCCTCGCGCTACGTCCGCGCCTCCCTTCCCAGGTTTAGGATGCCGGAAAATTCCATACCAAAGGAAGCAGCGTATCAGATAATAAACGACGAGCTGATGCTGGACGGAAACCCAAGACTAAATCTGGCGTCGTTTGTAACGACATGGATGGAGCCTGAATGCGACAAACTCATCATGGCTGCCATTAACAAGAACTATGTTGATATGGACGAATACCCTGTCACCACTGAGCTCCAGAACCGATGTGTGAACATGATAGCACATCTATTCAATGCGCCACTCGAAGACGGAGAGCCGGCAGTTGGCGTCGGCACAGTTGGGTCGTCGGAGGCCATAATGTTGGCCGGGTTGGCCTTCAAACGGAAGTGGCAGAACAGAAGGAAGGAACAGGGATTGCCTTTTGACAAGCCCAACATTGTGACTGGTGCCAATGTGCAGGTTTGTTGGGAGAAATTCGCCAGGTACTTCGAGGTGGAACTCAAAGAGGTGAAGCTTCGCGATGATTACTATGTAATGGACCCTGAGTTGGCCGTGGAAATGGTTGATGAGAACACCATTTGTGTGGCTGCAATCCTTGGTTCCACTCTCAATGGAGAGTTTGAAGATGTCAAGCGCCTTAACGACCTCCTTGAGCAAAAGAATAAGGAAACAGGATGGGAAACTCCAATTCACGTGGATGCAGCAAGTGGAGGATTCATAGCGCCATTTCTATATCCAGATCTTGTGTGGGACTTTAGGTTACCATTAGTGAAGAGCATTAATGTTAGTGGCCACAAGTATGGTCTTGTCTATGCTGGCATTGGTTGGTCCATTTGGAGAAGCAAAGAAGACCTTCCTGAGGAACTCATCTTCCATATTAACTATCTTGGTGCTGATCAACCCACTTTTACTCTCAACTTCTCCAAGGGTATATCTAACAACTTCATTCCAACACCATACTCTAATTCTACTATTTATTACTTTCCCTATTATTCATTAAATGTGGTATTTATTGATCCAGGTTCTAGCCAAGTTATTGCTCAGTATTACCAACTAATTCGTTTGGGTTATGAGGGATATAAGAATGTCATGGAAAATTGTAGAGATAACATGCTAGTACTTAAAGAGGGACTCGAGAAAACAGACCGTTTTAAAATTGTATCAAAAGATAACGGCGTGCCGTTGGTGGCCTTCACACTCAAGGACAGTAGCCACTTCAACGAGTTCCAAGTCTCGGACTTCTTGCGTCGCTTTGGTTGGATAGTGCCGGCATACACCATGCCTCCAGACGCGCAGCATGTTACCGTGCTGCGTGTTGTCATAAGGGAGGACTTCTCGCGCACCCTCGCGGAGCGCCTTGTCCTCGATGTCCAGAAAGTGTTGCATGAGCTGGAATTGCTTCCTGCAAGGGTAGTGTCCAACACCACCGTGACACCCAATGGAGAAGTTGTGGACAATAATGTGAAAGTCAAGAAGAGTGAATTGGAAACACAAAGGGAAATCACTATGGTTTGGAAGAAATTTGTGATGGAGAGGAAGAAGATGAATGAGAAGATGAATGGTGTTTGTTAG 1605 0.4636 MVLSETATGTDVSVHSTFASRYVRASLPRFRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEDGEPAVGVGTVGSSEAIMLAGLAFKRKWQNRRKEQGLPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLRDDYYVMDPELAVEMVDENTICVAAILGSTLNGEFEDVKRLNDLLEQKNKETGWETPIHVDAASGGFIAPFLYPDLVWDFRLPLVKSINVSGHKYGLVYAGIGWSIWRSKEDLPEELIFHINYLGADQPTFTLNFSKGISNNFIPTPYSNSTIYYFPYYSLNVVFIDPGSSQVIAQYYQLIRLGYEGYKNVMENCRDNMLVLKEGLEKTDRFKIVSKDNGVPLVAFTLKDSSHFNEFQVSDFLRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVLDVQKVLHELELLPARVVSNTTVTPNGEVVDNNVKVKKSELETQREITMVWKKFVMERKKMNEKMNGVC 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01119 534 Gene3D - 392 479 - -
Aip07g01119 534 Gene3D - 1 65 - -
Aip07g01119 534 Coils Coil 214 234 - -
Aip07g01119 534 Gene3D - 66 391 IPR015421 GO:0003824
Aip07g01119 534 PANTHER GLUTAMATE DECARBOXYLASE 349 534 IPR010107 GO:0004351|GO:0006536|GO:0030170
Aip07g01119 534 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 321 IPR002129 GO:0016830|GO:0019752|GO:0030170
Aip07g01119 534 Pfam Pyridoxal-dependent decarboxylase conserved domain 349 412 IPR002129 GO:0016830|GO:0019752|GO:0030170
Aip07g01119 534 SUPERFAMILY PLP-dependent transferases 15 475 IPR015424 -
Aip07g01119 534 PANTHER GLUTAMATE DECARBOXYLASE 349 534 - -
Aip07g01119 534 PANTHER GLUTAMATE DECARBOXYLASE 1 324 - -
Aip07g01119 534 PANTHER GLUTAMATE DECARBOXYLASE 1 324 IPR010107 GO:0004351|GO:0006536|GO:0030170
Aip07g01119 534 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 322 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01119 Aip-Chr7 15813281 15818874 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01119 1 534 Calmodulin-binding Proteins AT5G17330 76.536 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01119 K01580 - gmx:100796533 895.96