Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01116 ATGGATGCACAAGCTAAGAAAAAGGCAGCTTTTCGTGCTAAATTGGCCCAGAAGAAGGAAAAGCGTATAGATTCTCCCCTTGTAAGGTATAATGAATTCAATCAACCTGTTTGTCGGGTTTGTGATGTTGTTCTGAAGTCTGAATCTATATGGGATGCACACCAAATCTCCCGTAAGCATCGCGAGGCGATTGATAATCTTAAAGCTAATGCAGCTGGATTAACGCAGCAAAACAATGCAAAGCCTGCTGTTGGTAACAGATTTCCCAAAGCCAAACCTGAACAACCTTCCGAACCACTATCCAAAAAGCCTGAACCTTCACAAGAAGTACCTAAAGCCCAGTCGTCGTCTGTGCTTCCACCAAATTTTTTTGATGACAGTGCAAGGAAAACCGAAAAGAAATCATCTGATTCAGGAAGAAATGTGGGAGTTTCTGCTCAAAGTCAGGTGTCAAAGTTGGAGGAAAGAGGTAATTTTCGTGGTCATGATGCTGCGCCGTCAAAGGTTAGTCAAGCAACAACAGAGACTAGGCAGACCTCAGCCAAAACTTCTGATGCAGAGGACAACCAAACAAAAGGATCTCTGCCTGAAGGCTTTTTTGACAATAAGGATGCGGATTTGCGGGCACGTGGCATTAAGCCTGTGAAGCCAGATGTCAAGGATGAGTACAAGGAGTTTGAGAAGCTGATTCAAGAGGACTTGAAGGAGGTGGATGACCGATTGGAAGAAGAAGAGATTGATGCTGCTGAAATGATAGAAGAAGCTGAATCCGTTGAACAAAAGATCTTCAGGGAGAGAGTGGAAATGTTGAAGAAAAAGAGACTGGAGCTGAAAGCAGCAAAGTCAGCAAAGCGAGGTAAAACTTGTGAGGGTGAAACCAAGGAGGAGTCAAGGCATGAAGAAGAGTCATCCAGTGATGATGAAAGTGGTGAAAATTTTGCTGTGGACTGGAGAGCACAACACTTGTGA 969 0.4396 MDAQAKKKAAFRAKLAQKKEKRIDSPLVRYNEFNQPVCRVCDVVLKSESIWDAHQISRKHREAIDNLKANAAGLTQQNNAKPAVGNRFPKAKPEQPSEPLSKKPEPSQEVPKAQSSSVLPPNFFDDSARKTEKKSSDSGRNVGVSAQSQVSKLEERGNFRGHDAAPSKVSQATTETRQTSAKTSDAEDNQTKGSLPEGFFDNKDADLRARGIKPVKPDVKDEYKEFEKLIQEDLKEVDDRLEEEEIDAAEMIEEAESVEQKIFRERVEMLKKKRLELKAAKSAKRGKTCEGETKEESRHEEESSSDDESGENFAVDWRAQHL 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01116 322 Coils Coil 57 77 - -
Aip07g01116 322 MobiDBLite consensus disorder prediction 280 305 - -
Aip07g01116 322 MobiDBLite consensus disorder prediction 1 20 - -
Aip07g01116 322 MobiDBLite consensus disorder prediction 108 122 - -
Aip07g01116 322 MobiDBLite consensus disorder prediction 280 322 - -
Aip07g01116 322 PANTHER UNCHARACTERIZED 1 322 IPR040050 GO:0003676|GO:0005681|GO:0008270
Aip07g01116 322 MobiDBLite consensus disorder prediction 167 191 - -
Aip07g01116 322 MobiDBLite consensus disorder prediction 71 203 - -
Aip07g01116 322 MobiDBLite consensus disorder prediction 138 154 - -
Aip07g01116 322 Pfam Zinc-finger of C2H2 type 38 60 - -
Aip07g01116 322 Gene3D Classic Zinc Finger 31 69 - -
Aip07g01116 322 SUPERFAMILY beta-beta-alpha zinc fingers 30 70 IPR036236 -
Aip07g01116 322 Coils Coil 227 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01116 Aip-Chr7 15692021 15695331 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01116 1 322 C2H2 Transcription Factor Family AT3G02860 52.280 4.66e-93 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01116 K13104 - gmx:100808515 406.757