Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01111 ATGGGTAAGGAATTTTCTCATGAAGGGATTAATAGCGAGCATACATCATATGATCAGTATGAGCAGGAGGAAGAAAAACATGAGGAAGTTGACGTGGATTATATGGATGAGGACGACACAAATGTGGAACCAATGTTCGATTATCACGGCTTCGATGAAGGGTATAACATTGACTCACTCGAAGACATTGGGATGATTGAATTTTGGAACATCAGGGATGAAGATGTATGTCATTTTCACTTTTCTGATGTCGACATTGCATTTGAGTTCTACAATAGATATGCAAGGACAAGAGGCTTTAGTGCTCGGAAGAACAGGACTAGGAAGAGTCGTGCGGGCGTACTTAAGTTGAAGAATTTTGTATGTCATCGTGAAGGATTTAGACCGCCAAATAATTACGGCATCGGAAACCTTAAGAGAAAACCTACACCCGAGACAAGGTGTGGCTGCAGTGCAATGATGGAGATTCGTGTAGATGCACCTAGTGGTCGTTGGTTTATTTCTTATTTTTCTGATGAACACAATCATCCGCTTCTGGATTCTCGGTTGACTGGATTGCTCCCTGGGCATAGATTCATGTCCGAGGCTGATATTGGCCACATGGTTAACATGAAAAAGGGTGGGATTAGTGTTGGGCAGATATATCGGGCATTAGCAAATCAGGCAGGTGGCTACGAGTATCTCTCTTTCACGCAAAGGGACATGTACAATAAAATAGCAAAGCAGAGGCGCCAATTACCCGATGATGCATATGCATCTTTGAAGTATCTAGAAGATCAAGAAACAAATGACCCTTCTCTAATGCTAAGTCAGTACGGTTGTTTGATGATTGGTTTAGACAACTAG 846 0.4208 MGKEFSHEGINSEHTSYDQYEQEEEKHEEVDVDYMDEDDTNVEPMFDYHGFDEGYNIDSLEDIGMIEFWNIRDEDVCHFHFSDVDIAFEFYNRYARTRGFSARKNRTRKSRAGVLKLKNFVCHREGFRPPNNYGIGNLKRKPTPETRCGCSAMMEIRVDAPSGRWFISYFSDEHNHPLLDSRLTGLLPGHRFMSEADIGHMVNMKKGGISVGQIYRALANQAGGYEYLSFTQRDMYNKIAKQRRQLPDDAYASLKYLEDQETNDPSLMLSQYGCLMIGLDN 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01111 281 Pfam FAR1 DNA-binding domain 89 179 IPR004330 -
Aip07g01111 281 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 20 191 - -
Aip07g01111 281 MobiDBLite consensus disorder prediction 1 28 - -
Aip07g01111 281 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 20 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01111 Aip-Chr7 15592968 15593813 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip07g01111 FAR1 4.5e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01111 - - ahf:112723376 524.242