Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01035 ATGATGGGGTTCTCCCAAGGAATCTCCACTGATACAAGGGACCAAGATTCTCACTTCAAGAACCTCAAAGACAGAAACTTTTTGGGAAAACTGATATGGGACTTTGCATTTGCATGTGTTGCTTCGCCATGCACTTGTAGCAGTGGAAAAATCGATGGCAAAGAATTCAAAAACATAACTTTGGATCACAAGAAGGCTCTGTTGCTGGCAGAATCTAATGGGGTTGGAGCAGAATTGCTGAACAATGAACCTCAATCGGTTCATTCATCTTTCAGGTTCAGCTTCCGTTCTCAGGTTGAGCTAGAATCCTTCAACATGAGTTCTTCTGCTGCTGCTGCTAAGGCAGCCTTGTTGATGGTGAATTTGGAGTGTGAGTCTCTGAAATGGAGGACAATGGAGCCATTGGAGAAGAGCATATCCCCAGTGCCCAACACTTTGATCAGGTTCAATTATCATGAAATTGTGCATGCTACTCGCAATTTCTCCAAAGGTAGAGTGTTGGGAAGAGGGGCATTGAGCTGTGTTTTTAGGGGTAAAGTTGGTATATTGAGGACAACTGTTGCAATCAAAAGGTTGGACAAAGAAGACAAAGAGTGTGCCAAGGCCTTTTGCAGAGAGTTGATGATTGCAAGTTCTCTTCACAACACAAACATTGTACCTCTTTTGGGATTTTGCATTGATTCAGAGGAAGGCTTGTTTTTGGTCTACAAATTTGTTTCAGGAGGAAGCTTAGAACATCACTTGCATGGGAGGAAGAAAAGTAGAGGTTCACCACTTCCATGGTCTGTGAGATTTAAAGTTGCAATTGGGATTGCAAAGGCCATAGCTTATTTGCATTATGGAACTGAAAGATGTGTTGTTCATAGAGATATTAAGCCTTCAAACATTTTGCTTTCCTCTAAGAAAATTCCCAAGTTATGTGATTTTGGACTAGCTACATGGACTGTTGCACCTTCAGTACCTTTTCTATGCAAAGCTGCCAAAGGAACATTTGGTTATTTGGCCCCTGAATATTTTCAACATGGAAAGGTGTCAGATAAGACTGATGTTTATGCTTTTGGAGTGGTTTTATTAGAACTCATAACTGGCAGGAAGCCAATTGAAGCAAAGAGGACTCAAGGAGAAGAGAACTTGGTCTCATGGGCTAAAGCTTTGCTACAGAAAGGGAAATTAGCTATTGAAAAGTTGGTTGATCCTCAACTCCACTATAGCAATTCGAGATTCTCGAGTCAAATAGCTCGGATGATCGAAGCGGCGGCTGCTTGTATTACATTCGAAGAATCTAGAAGGCCCGGCATATACGAGATTCTTGCGATACTAAAAGGTGAACAAGAACTTGTTCTCTCTAGGAGGAGGAAGTCTGGTTACTACACACAGTTACAACAAAATAATAGTGATTTGAAAAGTCACTTGGCTTTGGCAATGCTTGGAGTATCAGAGTTTGATGATGATGATGATGATTATCTTTCTTGCCGCTAA 1479 0.4131 MMGFSQGISTDTRDQDSHFKNLKDRNFLGKLIWDFAFACVASPCTCSSGKIDGKEFKNITLDHKKALLLAESNGVGAELLNNEPQSVHSSFRFSFRSQVELESFNMSSSAAAAKAALLMVNLECESLKWRTMEPLEKSISPVPNTLIRFNYHEIVHATRNFSKGRVLGRGALSCVFRGKVGILRTTVAIKRLDKEDKECAKAFCRELMIASSLHNTNIVPLLGFCIDSEEGLFLVYKFVSGGSLEHHLHGRKKSRGSPLPWSVRFKVAIGIAKAIAYLHYGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTVAPSVPFLCKAAKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEAKRTQGEENLVSWAKALLQKGKLAIEKLVDPQLHYSNSRFSSQIARMIEAAAACITFEESRRPGIYEILAILKGEQELVLSRRRKSGYYTQLQQNNSDLKSHLALAMLGVSEFDDDDDDYLSCR 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01035 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 286 298 IPR008271 GO:0004672|GO:0006468
Aip07g01035 492 Gene3D Phosphorylase Kinase; domain 1 146 238 - -
Aip07g01035 492 Gene3D Transferase(Phosphotransferase) domain 1 239 461 - -
Aip07g01035 492 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1 11 488 - -
Aip07g01035 492 ProSiteProfiles Protein kinase domain profile. 161 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g01035 492 PANTHER OS01G0750732 PROTEIN 11 488 - -
Aip07g01035 492 Pfam Protein kinase domain 162 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g01035 492 SUPERFAMILY Protein kinase-like (PK-like) 141 440 IPR011009 -
Aip07g01035 492 SMART serkin_6 161 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01035 Aip-Chr7 13572194 13575174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01035 149 468 Trihelix Transcription Factor Family AT1G70460 41.265 2.21e-68 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Aip07g01035 Pkinase 3.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01035 - - adu:107481060 665.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01035 07 13572194 13575174 Aip07g01035 07 13572194 13575174 ECH