Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01034 ATGCTCCGAGTTGACTCGTCCGAGTCACGCGAGTCCGCCCTTCTCGCCTTGCTTAACCTTGCCGTCAAAGATGAAAAGAACAAAGTTAGCATTGTAGAAGCAGGTGCATTAGAACCTATAGTAAGTTTCCTAAAGTCACAAAATCCAAACATGCAAGAATATGCAAGTGCATCATTGCTCACTCTCTCTGCCTCTGCAACCAACAAACCAATTATCACTTCTTCTGGTGCCATTCCTCTTCTAGTAAAGATTCTAAGAGATGGAACACCACAAGCTAAAGCTGATTCATTAATGGCCCTCTCCAATTTATCAACACACTCTGATAACCTCGACATCATCCTCGAAACCAATCCGGTCGCTTCAATAATCCGCCTTCTCAAACCATGCAAGAAATCTTCGAAAACAGCAGAGAAATGCTGTGCTTTGGTAGAGTCATTGGTTGGTTATGACAAGTGCCGGACTGCGCTAACATGCGAAGAAGGCGGGGTTCTGGCAATTGTTGAAGTTCTTGAGAGTGGAACAAAGCAGGGTAAGGAACATGCTGTTGGAGCATTATTGAAAATGTGCGAGAGTGATAGGTGTAAATACAGAGAACCAATCCTAAGGGAAGGTGTTATTCCTGGACTTCTTGAACTCACAGTTCAAGGGACGGAAAAGTCTCAGCCAAAAGCACACACCCTTTTGCAATTACTTAGAGAATCACCTAATCCAAGATCAGAAACTGAGCCTAACACAATAGAGAACATAGTTTGCAACCTCATATCACAAATTGATGGGAAAGATGACCAAGCTGATGGTAAAGCTAAGAAGATGCTGGCAGAGATGGTCCAAGTCAGCATGGAAAGAAGTTTGAGACACTTACAACAAAGAGCAGCACTTGTATCCACCCCAAGTGATTTATCTATTACTAGTTGTGCTTCTCAGGTTTCTTTAAATTGGTAG 942 0.4289 MLRVDSSESRESALLALLNLAVKDEKNKVSIVEAGALEPIVSFLKSQNPNMQEYASASLLTLSASATNKPIITSSGAIPLLVKILRDGTPQAKADSLMALSNLSTHSDNLDIILETNPVASIIRLLKPCKKSSKTAEKCCALVESLVGYDKCRTALTCEEGGVLAIVEVLESGTKQGKEHAVGALLKMCESDRCKYREPILREGVIPGLLELTVQGTEKSQPKAHTLLQLLRESPNPRSETEPNTIENIVCNLISQIDGKDDQADGKAKKMLAEMVQVSMERSLRHLQQRAALVSTPSDLSITSCASQVSLNW 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01034 313 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 76 118 IPR000225 GO:0005515
Aip07g01034 313 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 283 - -
Aip07g01034 313 PANTHER U BOX DOMAIN-CONTAINING 1 283 - -
Aip07g01034 313 SUPERFAMILY ARM repeat 6 218 IPR016024 -
Aip07g01034 313 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 35 77 IPR000225 GO:0005515
Aip07g01034 313 Gene3D - 154 295 IPR011989 -
Aip07g01034 313 Pfam Armadillo/beta-catenin-like repeat 25 59 IPR000225 GO:0005515
Aip07g01034 313 Gene3D - 72 153 IPR011989 -
Aip07g01034 313 Gene3D - 1 71 IPR011989 -
Aip07g01034 313 SMART arm_5 149 190 IPR000225 GO:0005515
Aip07g01034 313 SMART arm_5 106 148 IPR000225 GO:0005515
Aip07g01034 313 SMART arm_5 24 64 IPR000225 GO:0005515
Aip07g01034 313 SMART arm_5 65 105 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01034 Aip-Chr7 13509728 13513896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01034 1 232 U-box Gene Family AT2G23140 36.207 1.31e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01034 - - aip:107606755 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01034 07 13509728 13513896 Aip07g01034 07 13509728 13513896 ECH