Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01021 ATGCGGAGGCACAGTCCAGGATACTACAGTCCGCCTAGGAGAGGGTACGGCGGCAGGGGAAGATCTCCTCCGCCGCCACCTCCTCCGTCGAGGAGGGGCTACGGTGGTGGTGGCGGCGGCGGCGGGAGGCGCGGCAGGGATAACAACAACAATGGAAGCCTTCTTGTTCGCAACATTCCCCTCGATTGCCGACCCGAGGAGCTTCGAGTCCCCTTCGAGCGGTTCGGACCCGTTCGTGATGTCTACATTCCCAAGGATTATTACTCAGGAGAACCTCGAGGCTTTGCGTTTGTGCAATTTGTGGATTCTTATGATGCTTCAGAGGCACAGTACCATATGAACAGACAAATCTTTGCCGGAAGGGAAATATCCGTTGTTGTCGCTGCTGAAACAAGAAAAAGACCAGAGGAAATGCGCCAAAGGACTAGGAGAGGACCAGCGAACTATGGGGGGAGAAGGTCTTATTATGGTCGCTCGCGCTCTCGCTCAGTATCACGCTCTCCACCTTATCACTCTGGTTCTAGAAGTAGATATCGCTCAAGATCATATTCTCCTGCTCCAAGAAGGCAAAGTGATTACTCTATTTCCCCTAGAAGGCAAGCAGAACACTCTAGATCACCTCGATCACCAAGAGGCCCCCCTAGAGAGCGAGATGCTGATCAGAAGCGCAGATCATATACTCCAGATTTTGGCAATGGTGTTGATCAGAATCAAAACAATGGATATCCTGAGTGA 735 0.5211 MRRHSPGYYSPPRRGYGGRGRSPPPPPPPSRRGYGGGGGGGGRRGRDNNNNGSLLVRNIPLDCRPEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDSYDASEAQYHMNRQIFAGREISVVVAAETRKRPEEMRQRTRRGPANYGGRRSYYGRSRSRSVSRSPPYHSGSRSRYRSRSYSPAPRRQSDYSISPRRQAEHSRSPRSPRGPPRERDADQKRRSYTPDFGNGVDQNQNNGYPE 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01021 244 MobiDBLite consensus disorder prediction 132 244 - -
Aip07g01021 244 MobiDBLite consensus disorder prediction 230 244 - -
Aip07g01021 244 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 52 130 IPR000504 GO:0003723
Aip07g01021 244 SUPERFAMILY RNA-binding domain, RBD 48 159 IPR035979 GO:0003676
Aip07g01021 244 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 29 242 - -
Aip07g01021 244 Gene3D - 45 184 IPR012677 -
Aip07g01021 244 MobiDBLite consensus disorder prediction 1 56 - -
Aip07g01021 244 PANTHER OS02G0252100 PROTEIN 29 242 - -
Aip07g01021 244 SMART rrm1_1 53 126 IPR000504 GO:0003723
Aip07g01021 244 MobiDBLite consensus disorder prediction 158 194 - -
Aip07g01021 244 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 54 123 IPR000504 GO:0003723
Aip07g01021 244 MobiDBLite consensus disorder prediction 18 32 - -
Aip07g01021 244 MobiDBLite consensus disorder prediction 195 225 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01021 27 114 Eukaryotic Initiation Factors Gene Family AT3G11400 37.500 1.75e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01021 K12900 - gmx:100804294 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01021 07 13299994 13302773 Aip07g01021 07 13299994 13302773 ECH