Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01020 ATGGCAATTGGGTTCATGGAGGTGCAGCTTCTCAAAGCAAATGACCTCAAAGTCACTGATTTTTTTGGCAAAATAGATCCATATGTTGTGATACAATACAAAGGACAAGAGCAAAGGAGCACAGTTGCTAATGGGCAAGGAAGAAATCCAACATGGAATGAGAAATTTATGTTCAGAGCAGAGTACCCAACTGGATCTGGAGATCAATACAAGCTCATTCTCAAAATCATGGACAAGGACACTTTTTCTAAGGATGATTCTCTTGGCCAAGCCATAATCTATGTTAAAGATTTATTGGCCCAAGGGATAGAGAATGGAGGTGCTAAGCTACAAGCTCTCAAGTATAGAGTAATTGATGAAAACAACTCATATTGTGGTGAAGTTGATGTTGCCATAACTTTTACCCCAAAGGTGGAAGAGAAATTTATTGGTGAAGATATTGGAGGATGGAAAGAAAGTTCCTACTAG 468 0.3889 MAIGFMEVQLLKANDLKVTDFFGKIDPYVVIQYKGQEQRSTVANGQGRNPTWNEKFMFRAEYPTGSGDQYKLILKIMDKDTFSKDDSLGQAIIYVKDLLAQGIENGGAKLQALKYRVIDENNSYCGEVDVAITFTPKVEEKFIGEDIGGWKESSY 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01020 155 PANTHER C2 DOMAIN-CONTAINING 1 154 - -
Aip07g01020 155 Pfam C2 domain 6 102 IPR000008 -
Aip07g01020 155 Gene3D C2 domain 2 137 IPR035892 -
Aip07g01020 155 SMART C2_3c 5 107 IPR000008 -
Aip07g01020 155 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 139 IPR035892 -
Aip07g01020 155 PANTHER ELICITOR-RESPONSIVE PROTEIN 1 1 154 - -
Aip07g01020 155 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01020 Aip-Chr7 13278661 13280661 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01020 3 110 C2H2 Transcription Factor Family AT4G21160 32.407 1.99e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01020 - - gmx:100791344 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01020 07 13278661 13280661 Aip07g01020 07 13278661 13280661 ECH