Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01012 ATGCTTACTTTCTCTGACTCTGGGCCCTTGTGCATGAACCACTTAATCAAAGTCAACTCGGTGATTTCTAGCGAGGGTTGGATCAATTTCACTTTTATTCCCTTTTTCTCCTCCAGAATTTCTAGTTACGTGGGAAGCAAGAAATCTTTGTCCTTGACCTGCTATGACAGTATCGAAAGCCGACCACGTTCTTCATGCAGCGCCAAGAACAAGCTAAAAGATCTAACGCCTTTGGTTACTGTTGATTCTGATGATTCTACCGTTGAGTTGCCGTTCTCAAGCAAGAGGAAGGCAGCAAACGCCTTTGGTTACTGCCTTGAATCTGAGGGTACAAGTCACGGCATGAGAGATGGGGCTAACGAGGAGGAGAAGAGGATTATGAATATCAAGAGAACAAAAACAGACTGTTTATTCAAAATAAACAGTTTGATTTCAACGTACTGCGAATTCAACCCCACTGCTGACCAAGAACAGGTTTCAAAGGAGGATTCCAAGAATACCGTTAGCTCAATGGATTCTCTGTCCAAGAAAGAAACAAAGAAACCAGTCAACCAAGAAAGAAACAGCCCCAGTGCCGTGAATTCAGGCTTGAGTGCCGATCAAGAACAGATTTCAAACAAGAATTCCAAGAAGACAGTGGATTCTCGGTCCAAAAAAGAATCAAAGAAACCAGTCAACCAAGAACCCTCTGAATTGCCACAAAATTTCAAGAACTTCAGTGATATGGGTGGCAGCAGGATCACTCTACTTATCGAAAAAACTCTCTATCACTCGAATTTGAATCCGCGACAAAACCGGCTTTCAATACCGTCACAGCAGGTCAAGGACAAAGATTTCTTGCTTCCCACGGAACTAGAAATTCTGGAGGAGAAAAAGGGAATAAAAGTGAAATTGATCCAACCCTCGCTAGAAACCACCGAGTTGACTTTGATTAAGTGGTTCATGCACAAGGGCCCAGAGTCAGAGAAAGTAAGCATATCCTACATTCTGAGGTCAAATTGGGTCAAAGTTGCAAAGGCTAACAATCTAGAAAAGGATGATGTTGTTCAAGTTTGGTCATTCCGAGTTGACGAGAAATTATGCATGGCAATTGTCAAGCTTTGA 1104 0.4248 MLTFSDSGPLCMNHLIKVNSVISSEGWINFTFIPFFSSRISSYVGSKKSLSLTCYDSIESRPRSSCSAKNKLKDLTPLVTVDSDDSTVELPFSSKRKAANAFGYCLESEGTSHGMRDGANEEEKRIMNIKRTKTDCLFKINSLISTYCEFNPTADQEQVSKEDSKNTVSSMDSLSKKETKKPVNQERNSPSAVNSGLSADQEQISNKNSKKTVDSRSKKESKKPVNQEPSELPQNFKNFSDMGGSRITLLIEKTLYHSNLNPRQNRLSIPSQQVKDKDFLLPTELEILEEKKGIKVKLIQPSLETTELTLIKWFMHKGPESEKVSISYILRSNWVKVAKANNLEKDDVVQVWSFRVDEKLCMAIVKL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01012 367 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED 105 367 - -
Aip07g01012 367 MobiDBLite consensus disorder prediction 185 206 - -
Aip07g01012 367 MobiDBLite consensus disorder prediction 154 239 - -
Aip07g01012 367 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 105 367 IPR005508 GO:0003677
Aip07g01012 367 Pfam B3 domain-containing protein At2g31720-like 241 339 IPR005508 GO:0003677
Aip07g01012 367 Gene3D - 240 366 IPR015300 -
Aip07g01012 367 MobiDBLite consensus disorder prediction 207 226 - -
Aip07g01012 367 SUPERFAMILY DNA-binding pseudobarrel domain 249 363 IPR015300 -
Aip07g01012 367 CDD B3_DNA 250 366 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01012 Aip-Chr7 13162037 13163602 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01012 241 364 B3 DNA Binding Superfamily AT1G05930 29.771 5.32e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01012 - - aip:110269262 439.884