LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip07g01003	ATGGCTGATAATAAGCAACCAAACTTGAACGGAGCCTACTACGGACCAGCCATTCCACCGGCTGAGCCGCCACGGCGCTACCGCCCTGACCGAAGCAGAAGAAGCTGCTTCTGCTGCCTATTCAGCGTCTTCTGGAAGATTCTTCTTGCGCTCATCGTGCTGGTGGTGATAGCAGGAGTGATATTCTACCTGGTGGTTCAACCTCGCATATTCAAGTTCTACGTCAACGAAGCAGAGATAACGAAATTCGATTACAACAGCAACACCACCCAACTCCGCTACAACATGGTGCTCAACTTCACCGCCCACAACCCAAACAAGAAGCTCAGCATCTACTACGACAAGGTTTTAGCCGAAGCCTTCTTCATGGACACGCAATTCGCCACTTCCGACGTCATCACTTTCATGAACTCCTTTAGGCAATACAAGAAGCAAACCAACGCCATGACCGGTGTTTTCTCCGGAGAACAGAACACTTTTCTTGATTATAGCCGCTACTCACAGATCAGCGATGACAAGAACAGTAGGTCTTTTGATATCTACGTGAAGCTCTACTTCAGGATGAGGTTTAGGCTTGGTGATGTTATTACTCGCACTTACAGGCCCAAAGTGAAGTGTGATCTCAAGGTTCCATTCGTCAATGGCACCAATGCTTTCACCTTCTTTACGCCCACCAAGTGCGATATTGATTTCTGA	696	0.4799	MADNKQPNLNGAYYGPAIPPAEPPRRYRPDRSRRSCFCCLFSVFWKILLALIVLVVIAGVIFYLVVQPRIFKFYVNEAEITKFDYNSNTTQLRYNMVLNFTAHNPNKKLSIYYDKVLAEAFFMDTQFATSDVITFMNSFRQYKKQTNAMTGVFSGEQNTFLDYSRYSQISDDKNSRSFDIYVKLYFRMRFRLGDVITRTYRPKVKCDLKVPFVNGTNAFTFFTPTKCDIDF	231

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip07g01003	231	PANTHER	OS05G0367900 PROTEIN	23	229	IPR044839	GO:0098542
	Aip07g01003	231	PANTHER	LATE EMBRYOGENESIS ABUNDANT PROTEIN	23	229	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip07g01003	Aip-Chr7	12842109	12842804	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip07g01003	65	220	SNARE and Associated Proteins	AT1G32270	28.205	7.65e-14	67.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip07g01003	-		-	gmx:100807701	290.812