Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00976 ATGACAGGATTTGGATCTTCATGTGGAGCATGCAAGTTCCTAAGGAGAAAGTGTGGTAGTGGTTGTGTTTTTGCTCCTTACTTCTCTTATGACCAAGCAGCAACACATTTTGCAGCTGTTCATAAGATCTATGGTGCTAGTAATGTGTCAAGGCTATTGTCACATCTTCCAATCCTTAATAGAAGTGATGCTGCCATCACTATCACTTATGAAGCTCTTGCTCGCATGCAAGATCCTATTTATGGTTGTGTTTCTCATATCTATGCATTGCAGCAACAGGTTGCAAGTTTGCAAGAGGAGATAGATATTATTGGGAATCTAATGGCAAATTCTACAACTGGTGCTACCAATTGTGGCATAAATAATGTTGAAGCACCAATAACAAAAATGGAGTACTCGAACTGTGGAATACAATATCCTATGCAAGATGATGATGATGCTGTCACAACAACTAATCAATGTTATCAAAATGAAATGGCCAATAATATTCTTTCTCAAGAAGGAAGTATGACACCCCGCCAAGGCTATGGCTCACACATGGATATAGAGCTTCCAAATAATAATGGAAATGGGTTTGAAGGGCCATTTGTATTTGATGACCATCCCAACTTCAATAATAATAATAATCCATTAGAGAAGTTCCTATCTGGAATTGATCAAGAGGGATTCATGAACCACCCGTGA 684 0.386 MTGFGSSCGACKFLRRKCGSGCVFAPYFSYDQAATHFAAVHKIYGASNVSRLLSHLPILNRSDAAITITYEALARMQDPIYGCVSHIYALQQQVASLQEEIDIIGNLMANSTTGATNCGINNVEAPITKMEYSNCGIQYPMQDDDDAVTTTNQCYQNEMANNILSQEGSMTPRQGYGSHMDIELPNNNGNGFEGPFVFDDHPNFNNNNNPLEKFLSGIDQEGFMNHP 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00976 227 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Aip07g00976 227 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Aip07g00976 227 PANTHER LOB DOMAIN-CONTAINING PROTEIN 33 1 183 - -
Aip07g00976 227 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00976 Aip-Chr7 12292873 12295100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00976 1 130 AS2 family AT5G06080 60.305 7.92e-55 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aip07g00976 LOB 3.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00976 K13945 - gmx:100787638 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00976 07 12292873 12295100 Aip07g00976 07 12292873 12295100 ECH