Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00975 ATGGCAAAGCGTTGGTGGGATGAAGAACCACCCCACAACACTCCAACAAGCAGCACCAACGGCGACCAAGACACCAACGATGGCGGCGATGACAATACCAACTCCAGCGCGGCGGAGCGAAGAGGAGGAAGAGGCCGCAGGCCACGAGGCCGGCCACCGGGGTCAAAGAACAAGCCAAAACAACCGCTAGTGGTTAAGGAGGAGCTCCCAAACGCCCTTCAAAGTCATATTCTAGAGATCAGCGACGGAGCAGACGTGGCTGATTCCCTTTCCACTTTTGCAACCCGTCGCCACCGTGGCGTTGCCGTGCTAAGCGGAACCGGCACTGTCACTGACGTCAATCTCGGGCAGCCCGCGGCGCCCGGAGGCATCGTTTCACTCCAAGGAACTTTCCAGATCCTTTCCCTCTCCGGTGCGATTCTTCCCCCGCCATCGCCGCCGAGCTCCACCGGACTAACGGTTTACCTCGCCGGAGTTCAAGGGGAGGTGGTTGGCGGTAGGGTGGTAGGACCGCTGGTGGCTTGTGGACCAGTGATGGTGGTTGCAGCAACGTTTGCTAATGCCACGTATGAAAGGCTACCGTTTGAGGAAGAAGAAGAAGAAGAAGATGAGGAAGAAGATGGAGTGATGCGGGTGCAGGTGGAGCCGCAGCAGGAGCAACAATCTGGTGTAAACGAAGGTTGTACTGAACCACCTGAACCACCACCACAACCACCACAGGTTTACAGTAATGCTCGTTCCGGTTTGTTCTCCGATAACAGTGAAATGGTGACGCATGATGATAGGCACGGTGCCGCTGTAGGGAGCAGGGGAGGAGGTAACGACGGCACTTTGCGGGCATCAAGGGAGATGGAGATGCGACGATGCGACATGGAGGAGAGGCGACGGTGCGGCATGGAGGAGAGGCAACAGTGCAGCATGGAGCAGGGACGGAACAGCGTCTTCGTTCTAGGCGAGGTGGCGACAGCAGCGCACCACAGCTTCTTGACCGACGACAGTGGACAGCATTTCAGAGGAGGTGGCGCTGAGAGCTTGCAGTGA 1041 0.5783 MAKRWWDEEPPHNTPTSSTNGDQDTNDGGDDNTNSSAAERRGGRGRRPRGRPPGSKNKPKQPLVVKEELPNALQSHILEISDGADVADSLSTFATRRHRGVAVLSGTGTVTDVNLGQPAAPGGIVSLQGTFQILSLSGAILPPPSPPSSTGLTVYLAGVQGEVVGGRVVGPLVACGPVMVVAATFANATYERLPFEEEEEEEDEEEDGVMRVQVEPQQEQQSGVNEGCTEPPEPPPQPPQVYSNARSGLFSDNSEMVTHDDRHGAAVGSRGGGNDGTLRASREMEMRRCDMEERRRCGMEERQQCSMEQGRNSVFVLGEVATAAHHSFLTDDSGQHFRGGGAESLQ 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00975 346 ProSiteProfiles PPC domain profile profile. 70 206 IPR005175 -
Aip07g00975 346 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 14 226 IPR014476 GO:0003680
Aip07g00975 346 SUPERFAMILY AF0104/ALDC/Ptd012-like 71 199 - -
Aip07g00975 346 MobiDBLite consensus disorder prediction 262 281 - -
Aip07g00975 346 Gene3D - 74 205 - -
Aip07g00975 346 CDD DUF296 76 157 IPR005175 -
Aip07g00975 346 MobiDBLite consensus disorder prediction 1 65 - -
Aip07g00975 346 Pfam Plants and Prokaryotes Conserved (PCC) domain 75 186 IPR005175 -
Aip07g00975 346 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 14 226 - -
Aip07g00975 346 MobiDBLite consensus disorder prediction 215 256 - -
Aip07g00975 346 MobiDBLite consensus disorder prediction 11 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00975 Aip-Chr7 12217649 12222803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00975 46 200 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 74.194 5.80e-66 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00975 - - gmx:100787100 222.631