Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00973 ATGCTCATCAAGTCAGTTCACATTTCAAAAATATTATTCTCCCCTCTTTTGCAAACCAAGTATCAAGATGTGACTTCCTCCACTGTCGCCGCCGCCGCCGCTCGCGACGCACGAGCTCCTTCCACCACCGCTCTCAATGCGGTTGCTCCTTTCGTCGTCACACGAGCTCTCTCGGCCGTGCTCTTGTCTTACGAGCTCCCTCCGCCGCCACTCTCGCGCTGCTTCTTCTCTCCTCGTCGGAGACTGTACATTGGTTTGCCTGATGCCAAGCAAAGAGTCCAAATTTTTTGTGTGCATAGTTCTGGAAAGCAACTTGCAGAGGATGTTGATTTTGAAAAGCTTGTCTTCCGAACTGTTGGATTTTCAGGAGCAGATATAAGAAACCTTGTCAATGAAGCAGCAATAATGATGGTTGCTTTCTTGATATATCGCCCTGTGATGAGACTTCTCAAGTCTCAGAGGAGTCCTGATGTTTGCTGGCCGTTGGATGATAATAATACTGCAAATGATGCATCTATAGAATTTGATCTTGTAGATCATTCTGGCAGTATGTATGGTTCTAGATATTTGTTCGTTAGATGTGACAATGAACCAGCTCCATGGATTGCTGATAATCTAAAAGCACTACACGACTTGCTTCCAAATCAAGCAGAGGGTAGTCAAGCTTATATACTGGACGACATTATCGACCATGTTAAATATTTGCAGCTTCAATTAAAGGAACTAAGTGGAAGTAGACTACAAGCTGAATCAACTGCTATACCACTGGTTTTCCATGAGCAGGGTTATGGGCATTATATTGACCAGCAGAAGCTGAATGAACCACTTGAAGAGATGATGGGAAAACTTCTTGAAGAGAATCCTGCATCTGCCAGTCAGCTGCTGGAGAACAATGGTCTTGTCCTACTGCCTATGGAGTTGGTTCAAGACTTGTACCAATCCATGCAAATCTTCGGCAACAGCAATGCACTTGTCTGA 978 0.4468 MLIKSVHISKILFSPLLQTKYQDVTSSTVAAAAARDARAPSTTALNAVAPFVVTRALSAVLLSYELPPPPLSRCFFSPRRRLYIGLPDAKQRVQIFCVHSSGKQLAEDVDFEKLVFRTVGFSGADIRNLVNEAAIMMVAFLIYRPVMRLLKSQRSPDVCWPLDDNNTANDASIEFDLVDHSGSMYGSRYLFVRCDNEPAPWIADNLKALHDLLPNQAEGSQAYILDDIIDHVKYLQLQLKELSGSRLQAESTAIPLVFHEQGYGHYIDQQKLNEPLEEMMGKLLEENPASASQLLENNGLVLLPMELVQDLYQSMQIFGNSNALV 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00973 325 PANTHER TRANSCRIPTION FACTOR BHLH66-LIKE ISOFORM X1 202 308 - -
Aip07g00973 325 CDD bHLH_AtbHLH_like 202 243 IPR045239 -
Aip07g00973 325 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 202 308 - -
Aip07g00973 325 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 137 IPR027417 -
Aip07g00973 325 Pfam AAA+ lid domain 108 135 IPR041569 -
Aip07g00973 325 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 202 247 IPR036638 GO:0046983
Aip07g00973 325 Gene3D - 87 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00973 Aip-Chr7 12132541 12138646 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00973 202 311 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 37.838 1.73e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00973 - - aip:107610608 332.413