Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00972 ATGGAGGAGGAATATGATAATAAGTGGTTGATGTGGATGAAGAGAAAACAAGTGTTTGTTGGAAAGAAGAGTAGTAGTAGTAGTTACTCATACTTATCATGGGAAGAGAGGGCTTTTGCAGAAGATGCAGCAAGAGTTCTTGGTGGAAGCACATGGCCGCCAAGATCATACACTTGCAATTTCTGCCATAGACACTTCACCTCTGCTCAAGCACTTGGTGGTCACATGAATGTTCACCGAAGAGATAGGGCTAGACTCAAACAATCATCATCATCATCATTAGGAGAAGATAACCAACAACATGCTATAACAGGCTCTTACTCTTCTTCAATTAAAAGGGGGCAACAGAAGAATTTTGAAGAACCTGAAGACACCGTGATCAGTAGTTGTAAGAAGTTAAAGACTACTACCACCATTTTCTGCCTCAAGCCATGTTTAAACGATAATGGAATTGAAGACTTGGATCTTGAACTCAGGCTAGGCGCCAAACAACAAAAAGTTAACTAG 507 0.4063 MEEEYDNKWLMWMKRKQVFVGKKSSSSSYSYLSWEERAFAEDAARVLGGSTWPPRSYTCNFCHRHFTSAQALGGHMNVHRRDRARLKQSSSSSLGEDNQQHAITGSYSSSIKRGQQKNFEEPEDTVISSCKKLKTTTTIFCLKPCLNDNGIEDLDLELRLGAKQQKVN 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00972 168 Gene3D Classic Zinc Finger 50 123 - -
Aip07g00972 168 SUPERFAMILY beta-beta-alpha zinc fingers 54 83 IPR036236 -
Aip07g00972 168 SMART c2h2final6 57 79 IPR013087 -
Aip07g00972 168 PANTHER OS07G0101800 PROTEIN 4 115 - -
Aip07g00972 168 Pfam C2H2-type zinc finger 57 81 - -
Aip07g00972 168 ProSitePatterns Zinc finger C2H2 type domain signature. 59 79 IPR013087 -
Aip07g00972 168 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 4 115 - -
Aip07g00972 168 ProSiteProfiles Zinc finger C2H2 type domain profile. 57 84 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00972 Aip-Chr7 12112887 12113687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00972 20 94 C2H2 Transcription Factor Family AT2G37740 66.667 4.99e-26 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aip07g00972 zf-C2H2_6 1.3e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00972 - - aip:107608478 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00972 07 12112887 12113687 Aip07g00972 07 12112887 12113687 ECH