Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00968 ATGGCATCAAGTAGCAAGTTTTGCAAGGATGCGTGTATGTGGAATGAGCCTCTTGCGGACAACTGGATGGAGGGCAAGACTGGTGTGTCGAATCCACAGAACGCATTCCACATAATGCCAGTTGGTAGCGAAATGTTTGTGTTATTCTTTCAGGACACAATGTATGATACGAGAGTGGAGGAAGATGCTGAGTTATCCGATTGGGAGGGAAGGGGGGCTTCAATGTTGCCCCTTTTTTTGGGTTTGGATGGGTTGCAAGCAGAAGATGTTCTTGAAATGGAGTTTTCTTCACCTCAGGAGGCAAGCGGCTTCTATAACAATTACAGCCGACTAAAGGGTTTTGCATCAAGGCGAGGCAAGACGGTTAGAAACACTGCCGGAGAGATAGTGCGATACACGTTCGTTTGTAATAGGCAGGGATTTCGAGAGAAGAAATGGTTGGAAAAGGTTGATCGCAAAAGGGAGCATAAGGTTGTAACCCGATGCGGATGCATGGCGGAGATGAGGATAAAGCGGAAAGAGGGTAGTGGGAGGTGGTATGTGTCGCGTTTTGTCGAGGAGCATAACCACGAACTTGCGTATGGGAAGCTTGTTGATTATCTGCGGTCACACAGGAAGATATCTGAGGTAGAAGTTGCTCAGCTAACAAGCATGAGGGAGATTGGGATTAGCATACCTAAGATTTATGAGTCATTCGCAGCACAACTAGGGGGCTTTAATCTGGTAACATTCACAAAACAAGATATGTATAATGAGATACGGAAACAGAGAGGTCTGCAAGGCGGAGACGTAAGTGCAGCTATTAGTTACTTGGAAGGTCTGGCACGCATCCATGGGAAAATGTTTTGGCGGTACAAGTTGGGGTCAGGGCAACAGCTATGCAACTTGTTTTGGAGCGATGGTCGTTGTCAGGAAGATTATGGGATATTCGGCGATGTGCTAGCATTCGACGCTACTTATGGCCGCAACAAGTACAACCTACCCGTTGTAGTCTTTTCCGGAGTAAACCACCACAACCAGACATGCGTATTGGAACAGCAATGGTCTCATGCGAATCGCAGGAGTCATATATTTGGGTTCTTTGCCGGTTTTTGGAATGCATGTAAGGTAAGGCACCGCATTCCGTCATCACGGATGGCGACCCGGCCATGCGGATAG 1158 0.4741 MASSSKFCKDACMWNEPLADNWMEGKTGVSNPQNAFHIMPVGSEMFVLFFQDTMYDTRVEEDAELSDWEGRGASMLPLFLGLDGLQAEDVLEMEFSSPQEASGFYNNYSRLKGFASRRGKTVRNTAGEIVRYTFVCNRQGFREKKWLEKVDRKREHKVVTRCGCMAEMRIKRKEGSGRWYVSRFVEEHNHELAYGKLVDYLRSHRKISEVEVAQLTSMREIGISIPKIYESFAAQLGGFNLVTFTKQDMYNEIRKQRGLQGGDVSAAISYLEGLARIHGKMFWRYKLGSGQQLCNLFWSDGRCQEDYGIFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTCVLEQQWSHANRRSHIFGFFAGFWNACKVRHRIPSSRMATRPCG 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00968 385 Pfam FAR1 DNA-binding domain 104 193 IPR004330 -
Aip07g00968 385 PANTHER OS02G0262500 PROTEIN 89 343 - -
Aip07g00968 385 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 89 343 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00968 Aip-Chr7 11950996 11952752 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip07g00968 FAR1 2e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00968 - - aip:107611673 637.876