Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00959 ATGGAAATGAGTGATGATGGAAATTACTTTTGTGATGCTAAAGAACCTCTAAGCGATAAAGGCTTGGACATGGATTCTGAAGCCGATGATTTTTTTGACGATAACTTCTATGAGAACTGGGATGGCAGGTCAATTGATGGTATTAGTGACCTTGGTAGTTTTAATTTAAATTCACTAATGGTGGATGAGATTAAGATGCTACATTTTCCATATCTTAATGCCGCCTTCTCTTTCTACAATTTGTATGCCAAAATGAACAGGTTTGCTGCAAGGAGGAGCAAGTTGAGGCACAATGTTAACAGTGATATCACGCAACAATCATTTGTTTGCTTTAGAGAGGAATTTAGGGAGACAAAATCCTATGACGAGAGCAGTCAACGTAAACATGAGCCAAAACCGGAGACTAGATATGGATGCCAGGCTGAGATATATGTTCATGTCCATATAGATACTGAGAGATGGATCATAACATATTTTCAAGAAGCTTGTAACCACGTTCTTGCTAATGAATTGACCTTCATGCTTCCGGGACATAGGAAGATGGATGCTGGCGCAATCAACCAAATGAACATGATGTTGAAAGTTAGGATAAAGACTCCTCAGATTTATGCATCCTTTGTCAACACATTAGGGGACTTCCAAAATGTTCCATTGTTAAAGAGAGGCATGTATAGCCTAATAGAAAAGCAACAAAGGATCTTAGGCAGGGATGCCATAGCTTGCTTAAAGTTCTTGCAATCAACGGATAAAAACGATTTCAGAATATTCGTTTGA 774 0.385 MEMSDDGNYFCDAKEPLSDKGLDMDSEADDFFDDNFYENWDGRSIDGISDLGSFNLNSLMVDEIKMLHFPYLNAAFSFYNLYAKMNRFAARRSKLRHNVNSDITQQSFVCFREEFRETKSYDESSQRKHEPKPETRYGCQAEIYVHVHIDTERWIITYFQEACNHVLANELTFMLPGHRKMDAGAINQMNMMLKVRIKTPQIYASFVNTLGDFQNVPLLKRGMYSLIEKQQRILGRDAIACLKFLQSTDKNDFRIFV 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00959 257 Pfam FAR1 DNA-binding domain 77 168 IPR004330 -
Aip07g00959 257 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 60 208 - -
Aip07g00959 257 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 60 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00959 Aip-Chr7 11855453 11856226 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip07g00959 FAR1 6e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00959 - - aip:107606601 452.981