Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00948 ATGATTGGGAAGGGTGAGCTGCACCAAGTACTTTATATCCTAAAGGCCGATTTCCCATCTAATGTGTTGCAGTTATCAACTTCTTCCATGTCTATTCCAAAGTTTGTTaagcaagGTATGGATGAGAGTATCAATCAAGAAATACCTAGGAATAATAATGCAAAGAATAATTCTGCTTCGAATCCTGTTACTTTGAATGAAGCTTCTCTTCCTCTTGGATCTAACGATAGTCAGCCACAAACTTCTAATGTTCAGAAttcaccgtcggatcaccgcttgccgtcgtctctgctctcgccgttgtctcgccggttgccgtcgtGGCAAACCTACGTCGATGACCACCTTCTCTGCAAAATTGAAGGCAACCACCTCTCCTCCGCCGCAATCGTCGGCCAAGATGGCAGTGTTTGGGCTCAGAGCTCTAATTTCCCTCAGTTCAAGCCTGAGGAAATTACTGCTATCATGAACGACTTTGCTGAGCCTTGA 489 0.364 MIGKGELHQVLYILKADFPSNVLQLSTSSMSIPKFVKQGMDESINQEIPRNNNAKNNSASNPVTLNEASLPLGSNDSQPQTSNVQNSPSDHRLPSSLLSPLSRRLPSWQTYVDDHLLCKIEGNHLSSAAIVGQDGSVWAQSSNFPQFKPEEITAIMNDFAEP 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00948 162 Pfam Profilin 107 160 IPR005455 GO:0003779
Aip07g00948 162 PRINTS Plant profilin signature 106 119 IPR005455 GO:0003779
Aip07g00948 162 PRINTS Plant profilin signature 132 145 IPR005455 GO:0003779
Aip07g00948 162 PRINTS Plant profilin signature 157 162 IPR005455 GO:0003779
Aip07g00948 162 PRINTS Profilin signature 126 135 IPR005455 GO:0003779
Aip07g00948 162 PRINTS Profilin signature 108 117 IPR005455 GO:0003779
Aip07g00948 162 PRINTS Profilin signature 145 162 IPR005455 GO:0003779
Aip07g00948 162 SUPERFAMILY Profilin (actin-binding protein) 107 162 IPR036140 -
Aip07g00948 162 Gene3D Dynein light chain 2a, cytoplasmic 107 162 - -
Aip07g00948 162 MobiDBLite consensus disorder prediction 48 98 - -
Aip07g00948 162 PANTHER PROFILIN 107 162 - -
Aip07g00948 162 PANTHER PROFILIN 107 162 IPR005455 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00948 Aip-Chr7 11669550 11674488 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00948 107 162 Cytoskeleton Gene Families AT2G19760 71.429 7.33e-28 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00948 K05759 - sly:543830 115.161