Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00925 ATGACCGAAGAAGAAGACCGAGCATCTGTTGAACCAATCGCCGGCAATGGCGTCTCTCTTCCGCAAGAGCTCGTTGGAGGAGGAGGAGGTACGGCCGAGACGGAGCCAGCGGGACGCGATGCGGAGGTGACTGTAGTTGGTGACGGCAATAGTGGTGGTGGTGCTGCCGCGGGAAAAGTAAAGGGACCGTGGTCTCCGGAAGAGGATGCGGTACTGAGCCGATTGGTGGCGCAGTTCGGAGCGAGGAATTGGAGCATGATCGCGCGGGGAGTTCCAGGCAGGTCAGGGAAGTCATGCCGGCTCCGATGGTGTAACCAGCTGGATCCTTGTGTTAAACGCAAGCCTTTCACTGAGGAAGAAGATTGCATTATCGTATCAGCCCATACAATCCATGGAAACAAGTGGGCAGCTATTGCAAGGCTTCTTCCAGGTAGAACAGATAATGCGATCAAGAACCACTGGAACTCTACCCTAAAGCGCAGGTGTATGGAACAGGGAAGATATGTTCCTCCGCGTGTTGAAGCGATGGAAGATGGTAGCATTGAGAAAACAAAGGCATCCTCTGAAGAAACCCTGTCAGTTGGGGATATGAATTCATATCCTACACAAGTTAGAAATGTCGTTATGAATACTGAGATTAAACAGCACGAAGATAAACCTCCAACTACAAGAAATGATGTTTCCGAAGTGGAGCAAAATCCTACCCTTCATCGACCAGTAGCACGTATTAGTGCATTTAGTGTTTATAATCCTACAAGCAGGCCAACAAATGGATCATCAAGTTCAAAGATTCTGCCATTGCAAAGCCCTTTGATCCAACTACCCAAAGTAGTTGAAGGAGCCTGCAAATTATTTGATGGTATTGAATGTGAACCAATGGTTCCATTGGAATGTGGTCATGGATGCTGTGCACCAGAATCAGGGGGAAGCCATTCTCATGGTTCTTCGCTATTAGGTCCCGAGTTTGTTGACTATTTGGATTCTCCCCCTTTCTTAAGTCATGAACTGATTTCCATAGCTACAGACCTAAATAACATTGCATGGATCAAGAGTGGCCTTGAGAACCATGGAGGTGCCAAAGTAACCGATAATGCCGCAAACTTGACAGGAACACAGGGGGCTGCTACTGCTTCACAAACGGGCTTCTTAGGCCAAGGCCAAAAGAATGACTTCATGCAAATGCAATATGAGGAGGGACCAGGAAAGGTCAGGTTTCTGGGTACAAATACAATGAAAGAAATGTTATCATCGAAGATGCCTCGGCAACATTTCGCAATGCCTGCAGAAGTTTGA 1293 0.4772 MTEEEDRASVEPIAGNGVSLPQELVGGGGGTAETEPAGRDAEVTVVGDGNSGGGAAAGKVKGPWSPEEDAVLSRLVAQFGARNWSMIARGVPGRSGKSCRLRWCNQLDPCVKRKPFTEEEDCIIVSAHTIHGNKWAAIARLLPGRTDNAIKNHWNSTLKRRCMEQGRYVPPRVEAMEDGSIEKTKASSEETLSVGDMNSYPTQVRNVVMNTEIKQHEDKPPTTRNDVSEVEQNPTLHRPVARISAFSVYNPTSRPTNGSSSSKILPLQSPLIQLPKVVEGACKLFDGIECEPMVPLECGHGCCAPESGGSHSHGSSLLGPEFVDYLDSPPFLSHELISIATDLNNIAWIKSGLENHGGAKVTDNAANLTGTQGAATASQTGFLGQGQKNDFMQMQYEEGPGKVRFLGTNTMKEMLSSKMPRQHFAMPAEV 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00925 430 CDD SANT 63 105 IPR001005 -
Aip07g00925 430 PANTHER MYB TRANSCRIPTION FACTOR-LIKE PROTEIN 42 356 - -
Aip07g00925 430 SUPERFAMILY Homeodomain-like 58 154 IPR009057 -
Aip07g00925 430 PANTHER MYB PROTEIN-RELATED 42 356 - -
Aip07g00925 430 Gene3D - 60 112 - -
Aip07g00925 430 Gene3D - 114 188 - -
Aip07g00925 430 CDD SANT 115 158 IPR001005 -
Aip07g00925 430 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 111 IPR017930 -
Aip07g00925 430 MobiDBLite consensus disorder prediction 1 64 - -
Aip07g00925 430 SMART sant 112 160 IPR001005 -
Aip07g00925 430 SMART sant 60 109 IPR001005 -
Aip07g00925 430 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 112 162 IPR017930 -
Aip07g00925 430 ProSiteProfiles Myb-like domain profile. 56 107 IPR001005 -
Aip07g00925 430 Pfam Myb-like DNA-binding domain 61 107 IPR001005 -
Aip07g00925 430 Pfam Myb-like DNA-binding domain 113 157 IPR001005 -
Aip07g00925 430 ProSiteProfiles Myb-like domain profile. 108 158 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00925 Aip-Chr7 11178316 11182094 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00925 27 392 MYB Transcription Factor Family AT3G55730 45.995 2.36e-101 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aip07g00925 Myb_DNA-binding 3.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00925 K09422 - gmx:100781228 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00925 07 11178316 11182094 Aip07g00925 07 11178316 11182094 ECH