Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00922 ATGAAGAACAATTGTGATTTGGTTGATCGAAAAGGCTATGGACAGAAAAGAAGAGTTGGAAGAAAGGAACTTCCGCCGTGCATCAACCCGAAGCAGCAGTTGCAGGAGGCGAGGAAGCATCTTCTTCAAGCGAAAATGGTGAAAGGTCGCCAAGGAGAGCGTGTCAGACTTTATGTCAGGGGTTCAATCCTTGGATACAAGAGGTCCAAGTCAAACCAATATCCAAACACCTCTCTTATCCAGATTGAGGGAGTAAACACCAAGGAAGAGGTTGCATGGTTACCAGGCCTCATGGTAACAGTGGTATTGTCCGTGCTAAGTTCAAGTCAAACCTGCCACCAAAATCAATGGGAGCAAGGGTCAGAGTCTTCATGTATCCAAGCAATATATGAGATTCTCTGGACCTCTTGTTGGCTGTAG 420 0.4595 MKNNCDLVDRKGYGQKRRVGRKELPPCINPKQQLQEARKHLLQAKMVKGRQGERVRLYVRGSILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWLPGLMVTVVLSVLSSSQTCHQNQWEQGSESSCIQAIYEILWTSCWL 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00922 139 SUPERFAMILY Translation proteins 57 103 IPR009000 -
Aip07g00922 139 Pfam Ribosomal protein L35Ae 57 108 IPR001780 GO:0003735|GO:0005840|GO:0006412
Aip07g00922 139 PANTHER 60S RIBOSOMAL PROTEIN L35A 46 103 IPR001780 GO:0003735|GO:0005840|GO:0006412
Aip07g00922 139 Gene3D translation elongation factor selb, chain A, domain 4 43 128 IPR038661 -
Aip07g00922 139 PANTHER 60S RIBOSOMAL PROTEIN L35A-1 46 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00922 Aip-Chr7 11035658 11038435 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00922 46 113 Cytoplasmic Ribosomal Protein Gene Family AT1G74270 67.647 1.94e-27 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00922 K02917 - ini:109147832 101.679