Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00909 ATGTCTGAAGCTTTGATCAATGGCTTGGCTGGTGCTGGTGGAGGGATCATAGCTCAGCTCATCACATACCCTCTTCAAACTGTAAACACTCGTCAGCAAACAGAGCGTGATCCGAAGAAGGATAAGACCAAAAGCATAGGAACCCTCCAGCAAATGTGCCAGGTTGTGAAACATGAGGGGTGGGAGCGGTTGTATGGAGGTTTGATGCCATCTCTAGTGGGTACAGCTGCATCTCAGGGTGTTTATTATTATTTCTATCAAATATTCAGGAACAAAGCCGAAGTGGCTGCACTAGAACAGAAAAGGCTAGGCATTGGCGATGGATCAGTTGGGATGTTCTCCTCACTTATTGTTGCTGCTTTCTCCGGGTGTGTTAATGTGCTATTGACAAATCCCATATGGGTAGTTGTTACACGCATGCAGACGCACAGAAAAGAGTCAAGCAGAACTCCGCCTGGTGATGTGTTGTTAAATGCCACTGAACAAGCATTACTTCCCACAGTTGAGCCTCTTGCTTATGGAACTAGCGATGTGATTCAAGAAGTCTACGGTGAAGCCGGAGTTTGGGGGTTTTGGAAAGGTGTATTACCGACATTGATCATGGTAAGCAACCCTTCTATACAGTTCATGCTCTATGAAACCATGTTGCTGAAGTTAAAAAGAAGACGTAGCCAAAGTAAGAAGGGCAACAATGGAGTATCTGCATTGGAGGTATTTCTTCTTGGAGCTTTGGCTAAGCTTGGAGCTACTATTGTGACATATCCTCTTCTAGTTGTGAAGGCAAGGCTGCAAGCTAGACAGGTCCGAAATGGAGACAAGAGACACCATTATAAAGGTACATTGGATGCCATTATCAAGATGATCCAGTATGAAGGGTTTTATGGATTTTACAAAGGCATGAGAACTAAGATTGTTCAAAGTGTGCTAGCTGCTGCTGTTTTGTTCATGGTGAAGGAAGAACTAGTTAAACAAATTCGTTTCTTGCTCACTAAGAATGCCACCAACTCTGTAAAACCAAAGCTTGTGTGA 1029 0.4383 MSEALINGLAGAGGGIIAQLITYPLQTVNTRQQTERDPKKDKTKSIGTLQQMCQVVKHEGWERLYGGLMPSLVGTAASQGVYYYFYQIFRNKAEVAALEQKRLGIGDGSVGMFSSLIVAAFSGCVNVLLTNPIWVVVTRMQTHRKESSRTPPGDVLLNATEQALLPTVEPLAYGTSDVIQEVYGEAGVWGFWKGVLPTLIMVSNPSIQFMLYETMLLKLKRRRSQSKKGNNGVSALEVFLLGALAKLGATIVTYPLLVVKARLQARQVRNGDKRHHYKGTLDAIIKMIQYEGFYGFYKGMRTKIVQSVLAAAVLFMVKEELVKQIRFLLTKNATNSVKPKLV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00909 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 92 IPR018108 -
Aip07g00909 342 Pfam Mitochondrial carrier protein 234 323 IPR018108 -
Aip07g00909 342 Pfam Mitochondrial carrier protein 6 91 IPR018108 -
Aip07g00909 342 Pfam Mitochondrial carrier protein 110 219 IPR018108 -
Aip07g00909 342 SUPERFAMILY Mitochondrial carrier 4 320 IPR023395 -
Aip07g00909 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 110 218 IPR018108 -
Aip07g00909 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 233 324 IPR018108 -
Aip07g00909 342 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 1 340 - -
Aip07g00909 342 Gene3D Mitochondrial carrier domain 101 326 IPR023395 -
Aip07g00909 342 Gene3D Mitochondrial carrier domain 2 100 IPR023395 -
Aip07g00909 342 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 340 IPR044712 GO:0006862|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00909 Aip-Chr7 10813757 10818015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00909 24 336 Chloroplast and Mitochondria Gene Families AT1G25380 27.900 5.94e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00909 K13354 - gmx:100775784 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00909 07 10813757 10818015 Aip07g00909 07 10813757 10818015 ECH