Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00905 ATGGATGTGATAAAGACGCAGCAAATATCGTGGAGGGCGATAGAGAAAGTTGTGGTGCACCCACTTGTGCTCCTCAGCATAGTCGACAACTACAACAGAGTCGCCAAGGACACGCGCAAGCGCGTCGTCGGCGTCCTCCTCGGCTCTTCCTTCAAAGGCACCGTCGACGTCACCAACAGCTATGCCGTTCCCTTTGAAGAAGATGACAAGGATCCTTCCATATGGTTTCTCGACCATAACTATCACGAGTCCATGTTCTCCATGTTTAAGAGAATTAACGCAAAGGAGCATGTTGTTGGGTGGTACAGCTCCGGCCCCAAGCTCCGAGAGAATGATCTTGACATTCATGCTTTGTTCAATGACTATGTTCCCAATCCTGTTTTGGTTATAATTGATGTTGAGCCTAAGGAACTGGGAATTCCTACCAAAGCTTACTATGCAGTTGAAGAGGTTAAAGAGAATGCCACTCAGAAAAGCCAAAAGGTCTTTGTGCATGTGCCATCAGAAATCGCTGCTCATGAAGTTGAGGAAATAGGAGTAGAACACTTGCTTAGAGATGTGAAGGATACAACAACTAGCACCCTTGCTACAGAGGTAAGTGGAAAACTTACAGCCTTGAAAGGTTTGGATGCAAGACTTAAAGAGATAAGAAGTTATCTTGACCTTGTCATCGATGGAAAGCTTCCTTTAAACCATGAGATTTTGTACCATCTGCAGGATGTGTTCAACCTGCTACCAAACCTTAATGTCAACGATCTGATAAAGGCTTTTGCAGTGAAAACAAATGATATGATGCTGGTAATATACCTGTCGTCCCTTATCAGAAGTGTAATTGCGCTCCACAACTTGATTAACAATAAGATGCTCAACAAAGAACATGAACGCGCAGAAGACTCGAAGTCAGTACCAGTATCAAGTACAGCTGGAAGTTAA 933 0.4405 MDVIKTQQISWRAIEKVVVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVTNSYAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSSGPKLRENDLDIHALFNDYVPNPVLVIIDVEPKELGIPTKAYYAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTTSTLATEVSGKLTALKGLDARLKEIRSYLDLVIDGKLPLNHEILYHLQDVFNLLPNLNVNDLIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHERAEDSKSVPVSSTAGS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00905 310 CDD MPN_RPN7_8 15 295 IPR033858 GO:0005838
Aip07g00905 310 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 13 124 IPR000555 GO:0005515|GO:0008233|GO:0008237
Aip07g00905 310 ProSiteProfiles MPN domain profile. 17 154 IPR037518 -
Aip07g00905 310 Pfam Maintenance of mitochondrial structure and function 174 285 IPR024969 -
Aip07g00905 310 SMART pad1_6 16 150 IPR000555 GO:0005515|GO:0008233|GO:0008237
Aip07g00905 310 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 1 310 - -
Aip07g00905 310 Gene3D Cytidine Deaminase, domain 2 10 194 - -
Aip07g00905 310 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 7 1 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00905 Aip-Chr7 10683695 10687153 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00905 19 248 Eukaryotic Initiation Factors Gene Family AT2G39990 29.060 6.78e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00905 K03038 - gmx:100790393 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00905 07 10683695 10687153 Aip10g01657 10 36920985 36925112 ECH
Aip07g00905 07 10683695 10687153 Aip07g00905 07 10683695 10687153 ECH