Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00904 ATGGAATCGAAAGGTGGGAGCAGTGGAAGCAAGTGTGGGCGTTGGAATCCGACGGCAGAACAAGTTTCGGTTCTGAGTGAACTGTTCAGCTCTGGTCTGCGCACCCCAACCACTGATCAGATTCAGCGTATCTCCAACCATCTCAGCTTTTACGGCAAGATTGAGAGTAAGAATGTCTTCTATTGGTTTCAGAACCATAAAGCTAGGGACAGACACAACAAGCGCCGCAAGCTCTCTTCTTCCTTTCCTCATCACTCCAAACATCTCAATCTTCTTCACTCTCAAAGTTTAGCTGAGATGTATCAAGTTTCACAGCCTCTCTTATGTTGA 330 0.4636 MESKGGSSGSKCGRWNPTAEQVSVLSELFSSGLRTPTTDQIQRISNHLSFYGKIESKNVFYWFQNHKARDRHNKRRKLSSSFPHHSKHLNLLHSQSLAEMYQVSQPLLC 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00904 109 Pfam Homeodomain 12 72 IPR001356 GO:0003677
Aip07g00904 109 CDD homeodomain 14 74 IPR001356 GO:0003677
Aip07g00904 109 SUPERFAMILY Homeodomain-like 9 76 IPR009057 -
Aip07g00904 109 Gene3D - 11 80 - -
Aip07g00904 109 SMART HOX_1 10 77 IPR001356 GO:0003677
Aip07g00904 109 ProSiteProfiles 'Homeobox' domain profile. 8 73 IPR001356 GO:0003677
Aip07g00904 109 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 4 87 IPR044555 GO:0003700|GO:0099402
Aip07g00904 109 PANTHER WUSCHEL-RELATED HOMEOBOX 7 4 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00904 Aip-Chr7 10678998 10679799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00904 6 105 Wox Gene Family AT3G11260 62.000 2.81e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Aip07g00904 Homeodomain 6.8e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00904 - - aip:107608272 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01662 10 37304285 37305621 Aip07g00904 07 10678998 10679799 PCT