Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00896 ATGGCACCAAAACCAACTAAGGCTGAGAAGAAGGTCGCTTACGATGCTAAGCTCTGCAAGCTTCTCGAGGAGTACACTCAGATACTTGTGGTCAATGCTGATAACGTTGGATCTAACCAGCTCCAGAACATTCGAAGGGGTCTTCGTGGTGATTCTATTGTTCTTATGGGAAAGAACACCATGATGAAGCGTTCTGTTAGAATGCATGCTGAGAGTACCGGGAACAATGTGTACCTCAGCCTTATCCCTCTTCTTGTTGGAAACGTTGGATTGATCTTCACCAAAGGTGACTTGAAGGAGGTTAGCGAGGAGGTTGCTAAGTACAAGGTTGGAGCACCTGCTCGTGTTGGTTTGGTTGCTCCAATTGATGTTGTTGTTCCTCCAGGCAACACAGGGCTTGACCCCTCACAGACCTCTTTCTTCCAGGTTCTGAATATTCCAACCAAGATCAACAAGGGTACTGTTGAAATTATCACCCCTGTGGAACTTATTAAGAAGGGTGACAAGGTCGGTTCTTCTGAAGCTGCACTGCTTTCCAAGCTTGGCATCAGGCCCTTTTCATATGGTCTTGTTGTCCTCTCTGTCTATGACAATGGTTCAGTATTTAGCCCTGAGGTTCTCGATCTCACTGAGGACGACCTTGTTGAGAAGTTCGCCATTGGAGTCTCAATGGTGACTGCACTCTCATTGGCCATTTCATACCCGACCCTTGCAGCTGCCCCACATATGTTCATCAACGCCTACAAGAATGTTTTATCTGACCCCAGCAAATTTGCCGTGGCGGCTGTCGCTGCTCCTGCTGCTGGTGCAGGTGGTGCTCCGGCTGCTGCTGCTGCTAAGGAAGAGGAAAAGAAGGAAGAGCCTGCTGAAGAATCTGATGATGACATGGGTTTCAGTTTGTTTGACTAG 909 0.4796 MAPKPTKAEKKVAYDAKLCKLLEEYTQILVVNADNVGSNQLQNIRRGLRGDSIVLMGKNTMMKRSVRMHAESTGNNVYLSLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLVEKFAIGVSMVTALSLAISYPTLAAAPHMFINAYKNVLSDPSKFAVAAVAAPAAGAGGAPAAAAAKEEEKKEEPAEESDDDMGFSLFD 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00896 302 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-1 1 252 - -
Aip07g00896 302 Pfam Insertion domain in 60S ribosomal protein L10P 114 183 IPR040637 -
Aip07g00896 302 MobiDBLite consensus disorder prediction 287 302 - -
Aip07g00896 302 Gene3D - 114 185 IPR043164 -
Aip07g00896 302 Gene3D - 6 209 IPR043141 -
Aip07g00896 302 Pfam 60s Acidic ribosomal protein 248 301 - -
Aip07g00896 302 MobiDBLite consensus disorder prediction 274 302 - -
Aip07g00896 302 PIRSF L10E 1 302 IPR030670 GO:0042254
Aip07g00896 302 Pfam Ribosomal protein L10 7 108 IPR001790 -
Aip07g00896 302 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 252 302 - -
Aip07g00896 302 SUPERFAMILY Ribosomal protein L10-like 8 134 IPR043141 -
Aip07g00896 302 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 252 - -
Aip07g00896 302 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-1 252 302 - -
Aip07g00896 302 CDD Ribosomal_P0_L10e 9 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00896 Aip-Chr7 10507085 10509187 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00896 1 301 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 78.505 2.61e-170 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00896 K02941 - gmx:100777482 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00896 07 10507085 10509187 Aip07g00896 07 10507085 10509187 ECH