Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00885 ATGTGGCCTTGGAGTTCAGAGACCGATAAGATTGCTTTGCTTGTTTTGAAGGACAAGCTTACCAATGGCGATCCTCATGCTATACCATCATGGAATGAGTCTCTACATTTCTGTGAATGGCAGGGCGTTACATGCAGTCGCCGCCACATGAGAGTCTCATCCCTACAACTGCAAAATCAATACTGGGGTGGTATTCTTGCGCCATCCTTAGGAAATCTAACGTTCCTCAAGGAGATCAATTTTACTAACATCAACTTGCATGGTGAAATTCCAGGAGAAGTTGGTCGTTTAAAGAGGCTGAAGATTCTTGACTTGAGGAACAATAATCATGGTGGTCATATTCCTGTGGAGATAATAAATTGTTCAAGCCTTGAGGTGATTATATTGATGTACAATAATTTAACTGGCAAAGTCCCTTCATGGTTTGTTCCTTCATGGTTTGGTTCTATGATGCAACTTACTCAACTGGGGCTTGGAGCCAACGGGTTTGTTGGTAGTATCCCACCTTCATTGGGAAATCTCTCATCTCTTGAGAAGTTGTCACTTGCATACAATCAATTGGAAGGAAGCATAACTCCAACTTTGGGTAGGTTGTCAACTTTGAAATTTTTGGGTTTGGGTGTAAATAAGTTTTCTGGTCAAGTTCCTCCTTCACTTTACAACCTTTCAAATATTCAAGTTCTTGATTTCACGGAAAACCAGTTAGTGGGTAATTTTCTCTCAAATTTACCTATGGCTTTTCCCAATCTTGAGATACTTTTGTGTGGAGGGAACCGATTCACCGGTACTTTTCCATCTTCAATATCCAACCTTTCTGAACTACAACAGTTTCAAATATCCAAAAATGTTTTTTATGGACCAATTTCTCCTACCGTAGGAAGTTTACACAAACTCCAGATATTTAATGTTGGACGGAATAGATTTGGGAATGGAAGAGCTCATGATTTGGATTTCCTTTCCTCATTGACTAATTGTACTCAATTGCAGAAATTAGGCTTTTATGAAAATTATTTAGGTGGAGTATTTCCAGATATCATAAGCAACTTATCAACAAATCTCGTTTTGCTTGGTATGGCGTTGAATCAAATATCTGGAAGGATACCAGAAGGAATTGGAAAACTAGTCAACCTAGCAACACTTGATATGGAGGGCAATTTTCTTGAGGGAACAATTCCAGATTCAATAGGAAAGCTAAAAAATCTTGGAGTGTTGTGGTTGGATGAAAATAAGTTCTATGGCAACATCCCTCTTGTCATTGGTAACCTTACTATGCTGTCTGACGTTGATCTGAGCTCAAATAAATTTGAAGGACTCATTCCCTTTACACTTGGATACTGCACCAACATGCAAAGATTTTCTGCATATGGAAACAACCTAAGTGGTAATATACCCAATCAAACATTTGGCTACCAGCAAGGTCTAATACAATTGTCTTTATACTCCAACTCTTTTACTGGCTCCATTCCTTCTGATCTTGGAAACTTGAACCATCTTTCCATCTTGCATTTACAAGATAACAAGCTAATTGGTGAGATTCCCGTGAGGCTTAGTGCTTGCACTGCTTTAACGGAGCTGGTACTAGAAAGAAACTCATTCCATGGAAGTATACCTTCATTCTTGGGATCTCTACTATCCCTTGAAATCTTGGACCTTTCTAATAACAACTTCTCAAGCACAATCCCACATGAACTTGTGAATCTCACGTTTCTGAATGCTTTGAACTTATCTTTTAACCATCTCTCTGGTGAGGTCCCGGTAGGAGGGGTATTCAATAATGTCACAGCAATATCACTCGTCGGAAACAAAGATCTTTGTGGTGGAATACCTCAATTGAATCTCCCTACATGCTCTACGTTGCCCTTAAAGAAGAAACACAAGAGATCTGTTAAAAAGAAAGTCATCCTCATAATCGCATTTGGAGGGGTTCTAATCTCTTCCGTTGCCTTTATTATTAGTATATATCTTCTCAAGAAGAAGCAAAAAAGGTTATCCACTCCTTCTCTAGCTTTGCAATATGGCTATGTGAAGGTTTCTTATGGAGAGCTACATCAAGCAACCAATGGATTTTCTTCCTTAAATTTAATTGGCACAGGAAGCTCTGGCTCAGTATATAGAGGAACCCTTCTCCATTTTGAGAGACCTGTTGCTGTGAAGGTGTTGAATCTTCAAACACGCGGAGCATCGAAGAGTTTCGTGTCCGAATGCAAAGCTCTAGGAAAATTGAAGCACAGAAACCTTCTCAATATATTGACCTGTTGTTCAGGTGTTGATTACAAAGGGGATGATTTCAAGGCCATAGTGTTTGAGTTCATGCCTAATGGGAGTTTAGAAAGCTTGTTGCACAACAACATTGAAGATAGCGAGTCCACAAATCGGAGTCTCAACCTGATGCAAAGAGTAAATATTGCTCTTGATGTAGCTTTTGCATTGGATTATCTTCACAATGATTCAGAGGAAGCTGTAGTTCACTGTGATGTTAAGCCAAGTAATGTTCTACTTGATGATGACATTGTTGCTCACCTGGGAGACTTTGGGTTAGCTAGGCTTCTTCATGGGCATGCCACAAGCTATACTAGTAGTAATCAAGCTAGTTCCTCTGTTATTAAGGGAACCATCGGATACCTTCCACCAGAGTATGGAGCAGGTGGGTCAGTATCACCACAAGGAGACATCTATAGCTATGGAATTCTTCTTTTGGAAATACTAACCGGAAAGAGACCAACGGATGGCATGTTTGGTGAAGATTTAAGCCTACACAAATTCTGTAAACTGGCAATTCCAGAAGGAATTACTGAGATTGTTGATTCAAGATTGATAACTCCGTTTGATGAAGGAGAAAGAAGGATCACACAACAGAAAAACATGGAGTGTTTAGTGTCTTTTGCTAGGATTGGAGTTGCATGTTCTGAAGAGTTCCCCACTCAACGGATGAACATTAAAGATGTCATAATGGAGCTGCATGCAATTAAACAGAAACTGCTTCCTTAG 2988 0.3963 MWPWSSETDKIALLVLKDKLTNGDPHAIPSWNESLHFCEWQGVTCSRRHMRVSSLQLQNQYWGGILAPSLGNLTFLKEINFTNINLHGEIPGEVGRLKRLKILDLRNNNHGGHIPVEIINCSSLEVIILMYNNLTGKVPSWFVPSWFGSMMQLTQLGLGANGFVGSIPPSLGNLSSLEKLSLAYNQLEGSITPTLGRLSTLKFLGLGVNKFSGQVPPSLYNLSNIQVLDFTENQLVGNFLSNLPMAFPNLEILLCGGNRFTGTFPSSISNLSELQQFQISKNVFYGPISPTVGSLHKLQIFNVGRNRFGNGRAHDLDFLSSLTNCTQLQKLGFYENYLGGVFPDIISNLSTNLVLLGMALNQISGRIPEGIGKLVNLATLDMEGNFLEGTIPDSIGKLKNLGVLWLDENKFYGNIPLVIGNLTMLSDVDLSSNKFEGLIPFTLGYCTNMQRFSAYGNNLSGNIPNQTFGYQQGLIQLSLYSNSFTGSIPSDLGNLNHLSILHLQDNKLIGEIPVRLSACTALTELVLERNSFHGSIPSFLGSLLSLEILDLSNNNFSSTIPHELVNLTFLNALNLSFNHLSGEVPVGGVFNNVTAISLVGNKDLCGGIPQLNLPTCSTLPLKKKHKRSVKKKVILIIAFGGVLISSVAFIISIYLLKKKQKRLSTPSLALQYGYVKVSYGELHQATNGFSSLNLIGTGSSGSVYRGTLLHFERPVAVKVLNLQTRGASKSFVSECKALGKLKHRNLLNILTCCSGVDYKGDDFKAIVFEFMPNGSLESLLHNNIEDSESTNRSLNLMQRVNIALDVAFALDYLHNDSEEAVVHCDVKPSNVLLDDDIVAHLGDFGLARLLHGHATSYTSSNQASSSVIKGTIGYLPPEYGAGGSVSPQGDIYSYGILLLEILTGKRPTDGMFGEDLSLHKFCKLAIPEGITEIVDSRLITPFDEGERRITQQKNMECLVSFARIGVACSEEFPTQRMNIKDVIMELHAIKQKLLP 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00885 995 Gene3D Phosphorylase Kinase; domain 1 650 770 - -
Aip07g00885 995 SMART serkin_6 689 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00885 995 Gene3D Ribonuclease Inhibitor 5 142 IPR032675 -
Aip07g00885 995 Gene3D Ribonuclease Inhibitor 143 312 IPR032675 -
Aip07g00885 995 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 12 993 - -
Aip07g00885 995 PANTHER LRR RECEPTOR-LIKE KINASE 12 993 - -
Aip07g00885 995 ProSitePatterns Protein kinases ATP-binding region signature. 695 718 IPR017441 GO:0005524
Aip07g00885 995 Pfam Leucine rich repeat N-terminal domain 7 46 IPR013210 -
Aip07g00885 995 SUPERFAMILY RNI-like 54 387 - -
Aip07g00885 995 ProSiteProfiles Protein kinase domain profile. 689 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00885 995 Pfam Protein kinase domain 691 923 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00885 995 SUPERFAMILY Protein kinase-like (PK-like) 670 986 IPR011009 -
Aip07g00885 995 ProSitePatterns Serine/Threonine protein kinases active-site signature. 821 833 IPR008271 GO:0004672|GO:0006468
Aip07g00885 995 SUPERFAMILY L domain-like 326 606 - -
Aip07g00885 995 Gene3D Ribonuclease Inhibitor 313 624 IPR032675 -
Aip07g00885 995 ProSiteProfiles Leucine-rich repeat profile. 545 568 IPR001611 GO:0005515
Aip07g00885 995 Pfam Leucine rich repeat 521 580 IPR001611 GO:0005515
Aip07g00885 995 Gene3D Transferase(Phosphotransferase) domain 1 771 993 - -
Aip07g00885 995 SMART LRR_typ_2 174 198 IPR003591 -
Aip07g00885 995 SMART LRR_typ_2 422 445 IPR003591 -
Aip07g00885 995 SMART LRR_typ_2 495 519 IPR003591 -
Aip07g00885 995 SMART LRR_typ_2 97 121 IPR003591 -
Aip07g00885 995 SMART LRR_typ_2 374 398 IPR003591 -
Aip07g00885 995 SMART LRR_typ_2 543 567 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00885 Aip-Chr7 10340588 10353119 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00885 4 992 Receptor kinase-like Gene Family AT3G47570 44.378 0.0 782
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Aip07g00885 Pkinase 4.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00885 - - ahf:112766919 1574.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00885 07 10340588 10353119 Aip07g00885 07 10340588 10353119 ECH