Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00883 ATGGCTTCCGCAGCCTCTCCAAGAATACCCACCGAGACGGTGAAGAACGCCGTGGAGGCTCTCCTGAAGTGGCGAGATTCCAATTCCGAGTCTCACAAATCCAAACTCTTCGACGCCGACGAAGAATTCGTTTACTTAGTCGTCACTCTGAAAACCATCCCTCACAAATCCCGCGTTAACCCTTACAAGGTCCCTTTACCCCACTCTCTCCTCTCTCCCTTCAACGAAACTTGCCTCATCATCGACGACAGGTCCAAATCCAAACTCACTAAACAAGAAGCTCAAAAGAAGATCAAGGCCGATAACGTCGCCGTTTCCAAGGTCCTCAAGTTGTCGAAGCTGGCCTCCGATTACCGCCCTTTTGAGGCGAAGCGGAAGCTCTGTGATTCATATGATCTTTTTTTCGCTGATAAGAGAGTGGTGCCTTTGATGCCCAGGCTGTTGGGGAAGAAATTCTTTAAGAAGAAGAAGGTGCCGGTGCAGGTGGACTTGACTAAGAAGAATTGGAAGGAGCAGGTGGATAAGGCGTGTTCGTCGGCGCTTCTGTTTCTTGGAACGGGGACTTGTTGTGTTGTGAAGGTTGCCAAGGTTTCCATGGAGAGCGAGCAGATTGTTGAGAATATGATGGCTGCCATTGAGGGGGTTGTTGAGGTTGTGCCGAAGAAGTGGGCGAATGTGAGGTCCTTGCATGTTAAGCTTTACGAGTCGCTGGCGCTGCCTGTTTTCCAGGCTGTTCCGGAGGTGAAGTTGAGGATTGAGGGAAGTAAGGTTGAGGAGGCGGAGAAAGAGAAGCAGACGATGGAGGAGGAGGAAGAGGGCGAAGACCATAGTGGCGCGAAGGCGGTGAAGAAGAAAAAGGGGAGGATTCATGAAGTTAGATACATGGATAGTGAAGTTGGTGAGGATAATGTTGAAGATTTGGCAGGTAGTGAGGATGATGGTGGTGGTGTTGTTATGGAGGAAGATTTAAAGGACGCTGGAAAAGGTAGTGGAGAATTGGCGAATAAGAAGAGGAAGAAAGGGGCATTGAGTGAGTTGAGCAGTGTCAAAGAATTGAAAAAATCTGTTAAGAGAAGTGGTAAACAGGTTGAGGATGGAGATTCAGGAAAGAAGGGGAAGAATATCAAGAAGAAACTATCTCTATTGAAGTCAGAAGAAGCTGATTTGAAAAAGAAAGTGAGGGCCAAGAAAAAAGTTGTGGCCACTAAGTTGTTCTTGCACGCCGGTTTCCACGGCTCCTCCTTTTAA 1248 0.48 MASAASPRIPTETVKNAVEALLKWRDSNSESHKSKLFDADEEFVYLVVTLKTIPHKSRVNPYKVPLPHSLLSPFNETCLIIDDRSKSKLTKQEAQKKIKADNVAVSKVLKLSKLASDYRPFEAKRKLCDSYDLFFADKRVVPLMPRLLGKKFFKKKKVPVQVDLTKKNWKEQVDKACSSALLFLGTGTCCVVKVAKVSMESEQIVENMMAAIEGVVEVVPKKWANVRSLHVKLYESLALPVFQAVPEVKLRIEGSKVEEAEKEKQTMEEEEEGEDHSGAKAVKKKKGRIHEVRYMDSEVGEDNVEDLAGSEDDGGGVVMEEDLKDAGKGSGELANKKRKKGALSELSSVKELKKSVKRSGKQVEDGDSGKKGKNIKKKLSLLKSEEADLKKKVRAKKKVVATKLFLHAGFHGSSF 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00883 415 Gene3D - 87 179 IPR016095 -
Aip07g00883 415 MobiDBLite consensus disorder prediction 258 281 - -
Aip07g00883 415 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 5 300 - -
Aip07g00883 415 SUPERFAMILY Ribosomal protein L1 12 242 IPR023674 -
Aip07g00883 415 MobiDBLite consensus disorder prediction 325 377 - -
Aip07g00883 415 PANTHER RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1 5 300 - -
Aip07g00883 415 CDD Ribosomal_L1 14 241 IPR028364 -
Aip07g00883 415 MobiDBLite consensus disorder prediction 258 286 - -
Aip07g00883 415 Pfam Ribosomal protein L1p/L10e family 32 236 IPR028364 -
Aip07g00883 415 Coils Coil 250 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00883 Aip-Chr7 10293850 10295744 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00883 130 232 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 31.068 1.58e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00883 K14775 - ahf:112697689 659.833