Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00870 ATGGCTCTTACAATCATCATCTTTCTCATATCTATTGCTTCACAAGCTTCAATAAACATGTTGTTAACTACAACAATGGCCATGCCATTAAGTTCTGAGACTGATAAGCTTGCTTTGTTGACTTTGAAGGACAAGCTTACTAATGGTGACTCAAATGTTCTTCCATCATGGAATGAGTCTCTTCATTTCTGTGAATGGCAGGGCGTTACATGTGGTCGCCGCCACAAGAGAGTCTCAGCATTGCATTTGCAAAATCAAGACTTGGGTGGTACTCTTGCACCATCATTAGGAAATCTAACCTTCCTCAAGAAGCTCAATCTTACTGACCTCAACTTGTACGGTCAGATTCCAAGACAAGTTGGTCGTTTAAAGAGGCTGCAGATTCTTAGCTTCCAGCAGAATCATCTTCATGGTGAGGTTCCCCGGGAAGTTGGTCGATTGAAGTCGTTGTACGCTCTCGAACTAACGAGAAATAATCTTCAAGGTGAGATTCCTATGGAGCTAATCAACTGCTCAAGTCTTAAGAAAATTGACTTGTCCTACAACAATTTAACTGGGAAAGTTCCATCATGGTTTGGATCCATGATGCAACTTACTATGTTGGAGCTTGGATTCAATAATCTAGTTGGTAATATCCCACCAACCTTGGGGAATCTTTCATCACTTGATACATTGTATCTTGCAGGAAACAATTTGGAAGGTCCTATAATTCATGCTTTGGGAAGGTTGTCAAATTTGGAGTACCTCTCTTTGAGTACCAATAATTTGTCAGGCCAAGTTCCTAATGCATTCTACAACCTTTCAAATCTTCAAGTTCTTGATATAAGTAACAACAAATTAATGGGTCCTATTTCTTCAAATTTACATCTTGCTTTTCCCAATCTGTCTGTTTTTGTTGTTGCATCAAATCAATTCACTGACAACTTCCCATCTTCATTATGCAATCTGACAAGATTGATAGAATTTGATTTATCATTCAATAATTTTAGAGGGCTAATTCCTCCTACTTGGGGAAGCTCAAATAATCTTATCTACTTTGGCATTAATTACAATGGTCTAATAGGAAGTGGGAAAGCTCAAGATTTGGATTTCCTTTCCTCTTTAACCAATTGCACTCAGTTGTCATATTTGATTTTGCAAGGAAATAATCTTGGTGGTGTATTGCCAAATCTCATAGGCAACTTCTCTACCAATCTCACTGTGCTTGATATAGCCCATAATCAAATATCTGGAAGCTTGCCTCAAGAAATTGGAAACTTGGTCGGCTTAGGTTTACTTGCTATGAATAAAAATTCCCTTGAGGGAACAATTCCAGATTCAATTGGGAATCTTAAAAATCTAGTAAGATTATCCTTGGATGATAACAATCTCTCAGGTAATATTCCTGTTGCCATTGGCAATCTTACTATGCTGTCAGAAGTTTATATGGACTCAAATAATCTTGAGGGAAGCATTCCATTTACCTTAAGATATTGCACAAATATGCAGACTTTCGCTGCCGGGAACAACAATTTAAGTGGTAGCATACCAACTCAAACCTTTGAATACCAACAAGGTTTAGTAAATCTTGATTTAGCCAGCAACTCCATTACTGGTCCAATCCCTCCAGAGTTTGGTAACCTGAAGCATCTTTCTAAATTGTATCTATTTTCAAACAAGTTGTCTGGTGTCATTCCCATTGAACTTGGTGCTTGTTCTGCATTGATAGAGCTTTATCTAGATGTAAACTTCTTCCATGGAAATATACCTTCCTTCTTGGGTTCTCTAAGATCACTTGAATTCTTAGGACTTTCCAACAACAGCTTCTCAGGCACAATCCCACATGAACTTGAAAACTTGACACAATTGAATGCATTGGACCTTTCCAATAACCAGCTCTATGGCAAGGTTCCATTAGGAGGAATCTTTAGTAACATCACAGCAATATCACTCATTGGAAACAAGGATCTCTGTGGTGGGATAACTCAACTGAATTTCCCTCCATGTCCAAAGTTGCCCTCAAATAAACACAAGAGCTCTCTTAGAAAGAAAATTATTGTCATCAGTGTTATTGGAGGGATTTTGATCTCGTTCATTATTTTTGTTAGCATCTATTGTTTCATGAGGAAGCCCAAGAAGTTACCTTTTTTGCCATCATTGGAACATAAGTACTTGAGGGTTTCTTATGGAGAGCTACATCAAGCAACAAATGGATTTTCTTCATCCAATTTAGTTGGCACAGGAAGTTTTGGTTCTGTGTATAGAGGAACCCTTGTTCATTTTGAGAGACCTGTTGCTGTGAAAGTGTTGAACCTTCAAACACGCGGGGCATCAAAGAGTTTCATGGCCGAATGCAAAGCTCTAGGAAAAATCAAGCACAGAAACCTTATCAACATATTGACTTGTTGTTCAAGTGTTGATTACAAAGGGGATGATTTCAAGGCCATAGTGTTTGAGTTCATGCCTAATGGGAGTCTAGAAACCTTGTTACACCACACTATTGAAGATAGCGAGTCAACAAGTCCAAGTCTCAACCTGATGCAAAGAGTAAATATTGCTCTTGATGTAGCTTTTGCATTGGATTATCTTCACAATGATTTAGAGGAAGCTGTAGTTCATTGTGATATTAAGCCAAGCAATGTTTTACTTGATGATGACATGGTTGCCCACTTGGGAGACTTTGGATTAGCTAGGCTTGTTCATGGTGTCGCAAGCCACTCTAGCAGTGATAAAGGAAGTTCCTCAGTAATCAAGGGAACCATCGGATATGTTCCACCAGAGTATGGAGCAGGTGGACCAGTATCACCACAAGGAGACATCTATAGATATGGAATTCTTCTTTTGGAAATACTAACCGGAAAGAAACCAACAGATGACATGTTTGGTGAAGATCTAAGCCTACACAAGTTTTGTAAAAAGGCAATTCCAGAAAGAATCACTGAGATTGTTGATTCAAGATTGTTAATTCCGTTTGGTGAAGGAGAAAGAAAGATCACGCAAAAGCAAAGTATCAAGGAGTGTATAGTGTCCTTTGCCAGGATTGGAGTTGCATGTTCTCAAGAGTTTCCCACTCGACGGATGAACATTAAAGATGTCGTAATGGAGCTGCATGCAATTAAACGCAAACTGCTTCCATAA 3117 0.3872 MALTIIIFLISIASQASINMLLTTTMAMPLSSETDKLALLTLKDKLTNGDSNVLPSWNESLHFCEWQGVTCGRRHKRVSALHLQNQDLGGTLAPSLGNLTFLKKLNLTDLNLYGQIPRQVGRLKRLQILSFQQNHLHGEVPREVGRLKSLYALELTRNNLQGEIPMELINCSSLKKIDLSYNNLTGKVPSWFGSMMQLTMLELGFNNLVGNIPPTLGNLSSLDTLYLAGNNLEGPIIHALGRLSNLEYLSLSTNNLSGQVPNAFYNLSNLQVLDISNNKLMGPISSNLHLAFPNLSVFVVASNQFTDNFPSSLCNLTRLIEFDLSFNNFRGLIPPTWGSSNNLIYFGINYNGLIGSGKAQDLDFLSSLTNCTQLSYLILQGNNLGGVLPNLIGNFSTNLTVLDIAHNQISGSLPQEIGNLVGLGLLAMNKNSLEGTIPDSIGNLKNLVRLSLDDNNLSGNIPVAIGNLTMLSEVYMDSNNLEGSIPFTLRYCTNMQTFAAGNNNLSGSIPTQTFEYQQGLVNLDLASNSITGPIPPEFGNLKHLSKLYLFSNKLSGVIPIELGACSALIELYLDVNFFHGNIPSFLGSLRSLEFLGLSNNSFSGTIPHELENLTQLNALDLSNNQLYGKVPLGGIFSNITAISLIGNKDLCGGITQLNFPPCPKLPSNKHKSSLRKKIIVISVIGGILISFIIFVSIYCFMRKPKKLPFLPSLEHKYLRVSYGELHQATNGFSSSNLVGTGSFGSVYRGTLVHFERPVAVKVLNLQTRGASKSFMAECKALGKIKHRNLINILTCCSSVDYKGDDFKAIVFEFMPNGSLETLLHHTIEDSESTSPSLNLMQRVNIALDVAFALDYLHNDLEEAVVHCDIKPSNVLLDDDMVAHLGDFGLARLVHGVASHSSSDKGSSSVIKGTIGYVPPEYGAGGPVSPQGDIYRYGILLLEILTGKKPTDDMFGEDLSLHKFCKKAIPERITEIVDSRLLIPFGEGERKITQKQSIKECIVSFARIGVACSQEFPTRRMNIKDVVMELHAIKRKLLP 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00870 1038 Gene3D Transferase(Phosphotransferase) domain 1 814 1036 - -
Aip07g00870 1038 Pfam Protein kinase domain 734 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00870 1038 SUPERFAMILY Protein kinase-like (PK-like) 706 1029 IPR011009 -
Aip07g00870 1038 SMART LRR_sd22_2 444 463 - -
Aip07g00870 1038 SMART LRR_sd22_2 123 138 - -
Aip07g00870 1038 SMART LRR_sd22_2 195 221 - -
Aip07g00870 1038 SMART LRR_sd22_2 613 641 - -
Aip07g00870 1038 SMART LRR_sd22_2 267 290 - -
Aip07g00870 1038 SMART LRR_sd22_2 243 258 - -
Aip07g00870 1038 SMART LRR_sd22_2 396 422 - -
Aip07g00870 1038 SMART LRR_sd22_2 541 562 - -
Aip07g00870 1038 Gene3D Phosphorylase Kinase; domain 1 712 813 - -
Aip07g00870 1038 SUPERFAMILY RNI-like 81 410 - -
Aip07g00870 1038 PRINTS Leucine-rich repeat signature 174 187 - -
Aip07g00870 1038 PRINTS Leucine-rich repeat signature 267 280 - -
Aip07g00870 1038 PANTHER LRR RECEPTOR-LIKE KINASE 22 141 - -
Aip07g00870 1038 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Aip07g00870 1038 ProSitePatterns Serine/Threonine protein kinases active-site signature. 864 876 IPR008271 GO:0004672|GO:0006468
Aip07g00870 1038 SUPERFAMILY L domain-like 396 652 - -
Aip07g00870 1038 ProSiteProfiles Protein kinase domain profile. 732 1033 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00870 1038 SMART LRR_typ_2 267 294 IPR003591 -
Aip07g00870 1038 SMART LRR_typ_2 243 266 IPR003591 -
Aip07g00870 1038 SMART LRR_typ_2 397 420 IPR003591 -
Aip07g00870 1038 SMART LRR_typ_2 541 565 IPR003591 -
Aip07g00870 1038 SMART LRR_typ_2 589 612 IPR003591 -
Aip07g00870 1038 SMART LRR_typ_2 444 468 IPR003591 -
Aip07g00870 1038 SMART LRR_typ_2 123 147 IPR003591 -
Aip07g00870 1038 SMART LRR_typ_2 613 638 IPR003591 -
Aip07g00870 1038 SMART LRR_typ_2 316 339 IPR003591 -
Aip07g00870 1038 PANTHER LRR RECEPTOR-LIKE KINASE 135 1036 - -
Aip07g00870 1038 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 135 1036 - -
Aip07g00870 1038 ProSitePatterns Protein kinases ATP-binding region signature. 738 761 IPR017441 GO:0005524
Aip07g00870 1038 Pfam Leucine rich repeat 503 554 IPR001611 GO:0005515
Aip07g00870 1038 Pfam Leucine rich repeat 221 280 IPR001611 GO:0005515
Aip07g00870 1038 Pfam Leucine rich repeat 170 208 IPR001611 GO:0005515
Aip07g00870 1038 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 22 141 - -
Aip07g00870 1038 Gene3D Ribonuclease Inhibitor 188 291 IPR032675 -
Aip07g00870 1038 Gene3D Ribonuclease Inhibitor 31 187 IPR032675 -
Aip07g00870 1038 Gene3D Ribonuclease Inhibitor 360 671 IPR032675 -
Aip07g00870 1038 Gene3D Ribonuclease Inhibitor 292 359 IPR032675 -
Aip07g00870 1038 SMART serkin_6 732 1037 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00870 Aip-Chr7 10157966 10196590 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00870 30 1037 Receptor kinase-like Gene Family AT3G47570 43.756 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Aip07g00870 Pkinase 1.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00870 - - ahf:112766919 1276.92